RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A ISN1Q99312 450 aa2.13□□□□□ -2.07
VMA9YCL005W-A Q0144Q9ZZW2 109 aa2.13□□□□□ -2.07
VMA9YCL005W-A YRF1-2P40105 1681 aa2.12□□□□□ -2.07
VMA9YCL005W-A INH1P01097 85 aa2.12□□□□□ -2.07
VMA9YCL005W-A ADH3P07246 375 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A SAM1P10659 382 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A HOM3P10869 527 aa2.12□□□□□ -2.07
VMA9YCL005W-A GCY1P14065 312 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
VMA9YCL005W-A URA6P15700 204 aa2.12□□□□□ -2.07
VMA9YCL005W-A EST1P17214 699 aaPredicted RBP2.12□□□□□ -2.07
VMA9YCL005W-A MDH1P17505 334 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
VMA9YCL005W-A YCP4P25349 247 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A STP22P25604 385 aa2.12□□□□□ -2.07
VMA9YCL005W-A YUR1P26725 428 aa2.12□□□□□ -2.07
VMA9YCL005W-A PHO91P27514 894 aa2.12□□□□□ -2.07
VMA9YCL005W-A HOM6P31116 359 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A SYN8P31377 255 aa2.12□□□□□ -2.07
VMA9YCL005W-A HMX1P32339 317 aa2.12□□□□□ -2.07
VMA9YCL005W-A SCM4P32564 187 aa2.12□□□□□ -2.07
VMA9YCL005W-A VPS17P32913 551 aa2.12□□□□□ -2.07
VMA9YCL005W-A SOF1P33750 489 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A SHE2P36068 246 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
VMA9YCL005W-A APE3P37302 537 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A CHK1P38147 527 aa2.12□□□□□ -2.07
VMA9YCL005W-A FIG1P38224 298 aa2.12□□□□□ -2.07
VMA9YCL005W-A ECM8P38246 354 aa2.12□□□□□ -2.07
VMA9YCL005W-A YPT31P38555 223 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A ARP1P38696 384 aa2.12□□□□□ -2.07
VMA9YCL005W-A HPA3P39979 161 aa2.12□□□□□ -2.07
VMA9YCL005W-A ISC1P40015 477 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A SLZ1P40167 298 aa2.12□□□□□ -2.07
VMA9YCL005W-A MMF1P40185 145 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A BMT5P40493 336 aa2.12□□□□□ -2.07
VMA9YCL005W-A CHS6P40955 746 aa2.12□□□□□ -2.07
VMA9YCL005W-A GLR1P41921 483 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A CAK1P43568 368 aaPredicted RBP2.12□□□□□ -2.07
VMA9YCL005W-A PMT4P46971 762 aa2.12□□□□□ -2.07
VMA9YCL005W-A YAE1P47118 141 aaPredicted RBP2.12□□□□□ -2.07
VMA9YCL005W-A TRM9P49957 279 aa2.12□□□□□ -2.07
VMA9YCL005W-A SEH1P53011 349 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A PKP2P53170 491 aa2.12□□□□□ -2.07
VMA9YCL005W-A SYF2P53277 215 aaPredicted RBP2.12□□□□□ -2.07
VMA9YCL005W-A GTR2P53290 341 aa2.12□□□□□ -2.07
VMA9YCL005W-A YGR168CP53293 376 aa2.12□□□□□ -2.07
VMA9YCL005W-A SAY1P53324 424 aa2.12□□□□□ -2.07
VMA9YCL005W-A ALG11P53954 548 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A ERV25P54837 211 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A LSM3P57743 89 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A TIM8P57744 87 aa2.12□□□□□ -2.07
VMA9YCL005W-A YPL113CQ02961 396 aa2.12□□□□□ -2.07
VMA9YCL005W-A YDR131CQ03899 556 aa2.12□□□□□ -2.07
VMA9YCL005W-A YDR387CQ04162 555 aa2.12□□□□□ -2.07
VMA9YCL005W-A TVP18Q04767 167 aa2.12□□□□□ -2.07
VMA9YCL005W-A YPR127WQ06494 345 aa2.12□□□□□ -2.07
VMA9YCL005W-A GPI11Q06636 219 aa2.12□□□□□ -2.07
VMA9YCL005W-A ECM30Q06673 1274 aa2.12□□□□□ -2.07
VMA9YCL005W-A REX4Q08237 289 aa2.12□□□□□ -2.07
VMA9YCL005W-A YLL056CQ12177 298 aa2.12□□□□□ -2.07
VMA9YCL005W-A YPL245WQ12179 454 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
VMA9YCL005W-A INP53Q12271 1107 aa2.12□□□□□ -2.07
VMA9YCL005W-A YLR126CQ12288 251 aa2.12□□□□□ -2.07
VMA9YCL005W-A PST2Q12335 198 aaKnown RBP2.12□□□□□ -2.07
VMA9YCL005W-A ATP14Q12349 124 aa2.12□□□□□ -2.07
VMA9YCL005W-A TFC7Q12415 435 aa2.12□□□□□ -2.07
VMA9YCL005W-A YLR099W-AQ3E798 87 aa2.12□□□□□ -2.07
VMA9YCL005W-A FLO11P08640 1367 aa2.11□□□□□ -2.07
VMA9YCL005W-A SCEIP03882 235 aa2.11□□□□□ -2.07
VMA9YCL005W-A HXK2P04807 486 aaKnown RBP2.11□□□□□ -2.07
VMA9YCL005W-A ARG81P05085 880 aa2.11□□□□□ -2.07
VMA9YCL005W-A ARG80P07249 177 aa2.11□□□□□ -2.07
VMA9YCL005W-A SEC4P07560 215 aaKnown RBP2.11□□□□□ -2.07
VMA9YCL005W-A PRB1P09232 635 aa2.11□□□□□ -2.07
VMA9YCL005W-A YFR010W-AP0C5N0 62 aa2.11□□□□□ -2.07
VMA9YCL005W-A RPS18AP0CX55 146 aaKnown RBP2.11□□□□□ -2.07
VMA9YCL005W-A RPS18BP0CX56 146 aaPredicted RBP2.11□□□□□ -2.07
VMA9YCL005W-A BAR1P12630 587 aa2.11□□□□□ -2.07
VMA9YCL005W-A MTF1P14908 341 aaKnown RBP2.11□□□□□ -2.07
VMA9YCL005W-A RPB3P16370 318 aaKnown RBP2.11□□□□□ -2.07
VMA9YCL005W-A TKL1P23254 680 aaKnown RBP2.11□□□□□ -2.07
VMA9YCL005W-A PPH22P23595 377 aa2.11□□□□□ -2.07
VMA9YCL005W-A BUD5P25300 642 aaPredicted RBP2.11□□□□□ -2.07
VMA9YCL005W-A SGF29P25554 259 aa2.11□□□□□ -2.07
VMA9YCL005W-A RER1P25560 188 aa2.11□□□□□ -2.07
VMA9YCL005W-A YCR099CP25657 155 aa2.11□□□□□ -2.07
VMA9YCL005W-A EHD3P28817 500 aa2.11□□□□□ -2.07
VMA9YCL005W-A MSK1P32048 576 aa2.11□□□□□ -2.07
VMA9YCL005W-A ARO7P32178 256 aa2.11□□□□□ -2.07
VMA9YCL005W-A DPH2P32461 534 aa2.11□□□□□ -2.07
VMA9YCL005W-A ERG1P32476 496 aaKnown RBP2.11□□□□□ -2.07
VMA9YCL005W-A PAH1P32567 862 aa2.11□□□□□ -2.07
VMA9YCL005W-A TCA17P32613 152 aa2.11□□□□□ -2.07
VMA9YCL005W-A ECT1P33412 323 aa2.11□□□□□ -2.07
VMA9YCL005W-A ASK1P35734 292 aa2.11□□□□□ -2.07
VMA9YCL005W-A YKL162CP36052 402 aa2.11□□□□□ -2.07
VMA9YCL005W-A MRPL11P36521 249 aaPredicted RBP2.11□□□□□ -2.07
VMA9YCL005W-A SOL2P37262 315 aa2.11□□□□□ -2.07
VMA9YCL005W-A ROT2P38138 954 aa2.11□□□□□ -2.07
VMA9YCL005W-A YBL029WP38201 376 aa2.11□□□□□ -2.07
VMA9YCL005W-A SHE3P38272 425 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms