RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W THP3Q12049 470 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W PER33Q12144 273 aa2.53□□□□□ -2
SWD3YBR175W SME1Q12330 94 aaPredicted RBP2.53□□□□□ -2
SWD3YBR175W TOM1Q03280 3268 aa2.53□□□□□ -2
SWD3YBR175W STH1P32597 1359 aa2.52□□□□□ -2.01
SWD3YBR175W YRF1-1P0CX20 1796 aa2.52□□□□□ -2.01
SWD3YBR175W YRF1-5P0CX21 1796 aa2.52□□□□□ -2.01
SWD3YBR175W YRF1-8P0CX22 1796 aa2.52□□□□□ -2.01
SWD3YBR175W QCR7P00128 127 aa2.52□□□□□ -2.01
SWD3YBR175W RPS3P05750 240 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W HEM4P06174 275 aa2.52□□□□□ -2.01
SWD3YBR175W RPS14AP06367 137 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W RPL20AP0CX23 172 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W RPL20BP0CX24 172 aaPredicted RBP2.52□□□□□ -2.01
SWD3YBR175W RPL35AP0CX84 120 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W RPL35BP0CX85 120 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W MRS3P10566 314 aa2.52□□□□□ -2.01
SWD3YBR175W ATR1P13090 542 aa2.52□□□□□ -2.01
SWD3YBR175W HOM6P31116 359 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W FUN26P31381 517 aa2.52□□□□□ -2.01
SWD3YBR175W KTI12P34253 313 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W AST1P35183 429 aa2.52□□□□□ -2.01
SWD3YBR175W VPS51P36116 164 aa2.52□□□□□ -2.01
SWD3YBR175W YBP1P38315 674 aa2.52□□□□□ -2.01
SWD3YBR175W SHC1P39000 512 aa2.52□□□□□ -2.01
SWD3YBR175W MET30P39014 640 aa2.52□□□□□ -2.01
SWD3YBR175W RPS14BP39516 138 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W PCI8P40512 444 aa2.52□□□□□ -2.01
SWD3YBR175W MDV1P47025 714 aa2.52□□□□□ -2.01
SWD3YBR175W ADO1P47143 340 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W MGA1P53050 456 aa2.52□□□□□ -2.01
SWD3YBR175W SUR7P54003 302 aa2.52□□□□□ -2.01
SWD3YBR175W RNY1Q02933 434 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W HCR1Q05775 265 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W MHR1Q06630 226 aa2.52□□□□□ -2.01
SWD3YBR175W MRX9Q07349 420 aaKnown RBP2.52□□□□□ -2.01
SWD3YBR175W GPM2Q12008 311 aa2.52□□□□□ -2.01
SWD3YBR175W TAF10Q12030 206 aa2.52□□□□□ -2.01
SWD3YBR175W FCY22Q12119 530 aa2.52□□□□□ -2.01
SWD3YBR175W AYT1Q12226 474 aa2.52□□□□□ -2.01
SWD3YBR175W TFC7Q12415 435 aa2.52□□□□□ -2.01
SWD3YBR175W TRP1P00912 224 aa2.51□□□□□ -2.01
SWD3YBR175W CYC3P06182 269 aa2.51□□□□□ -2.01
SWD3YBR175W YFL068WP0CX99 160 aa2.51□□□□□ -2.01
SWD3YBR175W YLL066W-AP0CY00 160 aa2.51□□□□□ -2.01
SWD3YBR175W YLL067W-AP0CY01 160 aa2.51□□□□□ -2.01
SWD3YBR175W FBA1P14540 359 aaKnown RBP2.51□□□□□ -2.01
SWD3YBR175W SNF6P18888 332 aa2.51□□□□□ -2.01
SWD3YBR175W MIR1P23641 311 aaKnown RBP2.51□□□□□ -2.01
SWD3YBR175W SSO1P32867 290 aa2.51□□□□□ -2.01
SWD3YBR175W PRX1P34227 261 aaKnown RBP2.51□□□□□ -2.01
SWD3YBR175W ASK1P35734 292 aa2.51□□□□□ -2.01
SWD3YBR175W CUE1P38428 203 aa2.51□□□□□ -2.01
SWD3YBR175W NDT80P38830 627 aa2.51□□□□□ -2.01
SWD3YBR175W IKI1P38874 309 aa2.51□□□□□ -2.01
SWD3YBR175W PET8P38921 284 aa2.51□□□□□ -2.01
SWD3YBR175W MAM33P40513 266 aa2.51□□□□□ -2.01
SWD3YBR175W RPR2P40571 144 aa2.51□□□□□ -2.01
SWD3YBR175W NCA3P46955 337 aa2.51□□□□□ -2.01
SWD3YBR175W IBA57P47158 497 aa2.51□□□□□ -2.01
SWD3YBR175W MIC26P50087 233 aa2.51□□□□□ -2.01
SWD3YBR175W YPS5P53057 165 aa2.51□□□□□ -2.01
SWD3YBR175W NIF3P53081 288 aa2.51□□□□□ -2.01
SWD3YBR175W TPN1P53099 579 aa2.51□□□□□ -2.01
SWD3YBR175W YNL247WP53852 767 aaKnown RBP2.51□□□□□ -2.01
SWD3YBR175W CTF19Q02732 369 aa2.51□□□□□ -2.01
SWD3YBR175W SKI8Q02793 397 aaPredicted RBP2.51□□□□□ -2.01
SWD3YBR175W DIG1Q03063 452 aaKnown RBP2.51□□□□□ -2.01
SWD3YBR175W GMC1Q04399 608 aa2.51□□□□□ -2.01
SWD3YBR175W DPP1Q05521 289 aa2.51□□□□□ -2.01
SWD3YBR175W ARC18Q05933 178 aaKnown RBP2.51□□□□□ -2.01
SWD3YBR175W PEX30Q06169 523 aa2.51□□□□□ -2.01
SWD3YBR175W YLR446WQ06204 433 aa2.51□□□□□ -2.01
SWD3YBR175W ATG17Q06410 417 aa2.51□□□□□ -2.01
SWD3YBR175W YPR091CQ06833 770 aa2.51□□□□□ -2.01
SWD3YBR175W YDL114WQ07530 308 aa2.51□□□□□ -2.01
SWD3YBR175W DTD1Q07648 150 aaKnown RBP2.51□□□□□ -2.01
SWD3YBR175W DSE3Q08729 430 aa2.51□□□□□ -2.01
SWD3YBR175W RSA1Q08932 381 aa2.51□□□□□ -2.01
SWD3YBR175W YOR114WQ12219 294 aa2.51□□□□□ -2.01
SWD3YBR175W YCT1Q12235 531 aa2.51□□□□□ -2.01
SWD3YBR175W JLP1Q12358 412 aa2.51□□□□□ -2.01
SWD3YBR175W SNU23Q12368 194 aaPredicted RBP2.51□□□□□ -2.01
SWD3YBR175W YDL199CQ12407 687 aa2.51□□□□□ -2.01
SWD3YBR175W PRM4Q12498 284 aa2.51□□□□□ -2.01
SWD3YBR175W SPP41P38904 1435 aa2.51□□□□□ -2.01
SWD3YBR175W DNF3Q12674 1656 aa2.5□□□□□ -2.01
SWD3YBR175W RPL28P02406 149 aaKnown RBP2.5□□□□□ -2.01
SWD3YBR175W RPL15AP05748 204 aaKnown RBP2.5□□□□□ -2.01
SWD3YBR175W PET494P07390 489 aaPredicted RBP2.5□□□□□ -2.01
SWD3YBR175W RPS18AP0CX55 146 aaKnown RBP2.5□□□□□ -2.01
SWD3YBR175W RPS18BP0CX56 146 aaPredicted RBP2.5□□□□□ -2.01
SWD3YBR175W CUP1-1P0CX80 61 aa2.5□□□□□ -2.01
SWD3YBR175W CUP1-2P0CX81 61 aa2.5□□□□□ -2.01
SWD3YBR175W CPR1P14832 162 aaKnown RBP2.5□□□□□ -2.01
SWD3YBR175W CKA2P19454 339 aa2.5□□□□□ -2.01
SWD3YBR175W CMK2P22517 447 aa2.5□□□□□ -2.01
SWD3YBR175W CDC10P25342 322 aaKnown RBP2.5□□□□□ -2.01
SWD3YBR175W PMT2P31382 759 aa2.5□□□□□ -2.01
SWD3YBR175W ATS1P31386 333 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms