RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C BAT1P38891 393 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C OXA1P39952 402 aa3.61□□□□□ -1.83
NPL4YBR170C SMB1P40018 196 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C RAD17P48581 401 aa3.61□□□□□ -1.83
NPL4YBR170C YGR015CP53208 328 aa3.61□□□□□ -1.83
NPL4YBR170C YNR066CP53752 436 aa3.61□□□□□ -1.83
NPL4YBR170C RNY1Q02933 434 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C YET2Q04210 160 aa3.61□□□□□ -1.83
NPL4YBR170C YPL245WQ12179 454 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C THP2O13539 261 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C PET494P07390 489 aaPredicted RBP3.61□□□□□ -1.83
NPL4YBR170C QRI5P32344 111 aa3.61□□□□□ -1.83
NPL4YBR170C VMA6P32366 345 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C MAL32P38158 584 aa3.61□□□□□ -1.83
NPL4YBR170C SHE1P38200 338 aa3.61□□□□□ -1.83
NPL4YBR170C RPC17P47076 161 aa3.61□□□□□ -1.83
NPL4YBR170C YPS5P53057 165 aa3.61□□□□□ -1.83
NPL4YBR170C MAL12P53341 584 aa3.61□□□□□ -1.83
NPL4YBR170C TPS1Q00764 495 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C SEC13Q04491 297 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C TAF9Q05027 157 aa3.61□□□□□ -1.83
NPL4YBR170C DCR2Q05924 578 aa3.61□□□□□ -1.83
NPL4YBR170C YOR376WQ08900 122 aa3.61□□□□□ -1.83
NPL4YBR170C YMR230W-AQ3E7B5 62 aa3.61□□□□□ -1.83
NPL4YBR170C STE7P06784 515 aa3.6□□□□□ -1.83
NPL4YBR170C AEP1P32493 518 aa3.6□□□□□ -1.83
NPL4YBR170C GPX1P36014 167 aa3.6□□□□□ -1.83
NPL4YBR170C YBR241CP38142 488 aa3.6□□□□□ -1.83
NPL4YBR170C RTC3P38804 111 aaPredicted RBP3.6□□□□□ -1.83
NPL4YBR170C SHC1P39000 512 aa3.6□□□□□ -1.83
NPL4YBR170C VEL1P53058 206 aa3.6□□□□□ -1.83
NPL4YBR170C SDS23P53172 527 aa3.6□□□□□ -1.83
NPL4YBR170C BOR1P53838 576 aa3.6□□□□□ -1.83
NPL4YBR170C ADD37Q03233 198 aa3.6□□□□□ -1.83
NPL4YBR170C EBS1Q03466 884 aaKnown RBP3.6□□□□□ -1.83
NPL4YBR170C DIB1Q06819 143 aaPredicted RBP3.6□□□□□ -1.83
NPL4YBR170C FUS3P16892 353 aaKnown RBP3.59□□□□□ -1.83
NPL4YBR170C AAT2P23542 418 aaKnown RBP3.59□□□□□ -1.83
NPL4YBR170C ASF2P32448 525 aaPredicted RBP3.59□□□□□ -1.83
NPL4YBR170C RIB1P38066 345 aa3.59□□□□□ -1.83
NPL4YBR170C THO1P40040 218 aaKnown RBP3.59□□□□□ -1.83
NPL4YBR170C DSN1P40568 576 aa3.59□□□□□ -1.83
NPL4YBR170C JHD2P47156 728 aaPredicted RBP3.59□□□□□ -1.83
NPL4YBR170C NRM1P53718 249 aa3.59□□□□□ -1.83
NPL4YBR170C FOL3Q12676 427 aaPredicted RBP3.59□□□□□ -1.83
NPL4YBR170C CMK2P22517 447 aa3.58□□□□□ -1.84
NPL4YBR170C HOM6P31116 359 aaKnown RBP3.58□□□□□ -1.84
NPL4YBR170C VPS21P36017 210 aaKnown RBP3.58□□□□□ -1.84
NPL4YBR170C MIC12P38341 106 aa3.58□□□□□ -1.84
NPL4YBR170C TIM17P39515 158 aa3.58□□□□□ -1.84
NPL4YBR170C MIG3P39943 394 aa3.58□□□□□ -1.84
NPL4YBR170C SER33P40510 469 aa3.58□□□□□ -1.84
NPL4YBR170C YNL095CP53932 642 aa3.58□□□□□ -1.84
NPL4YBR170C SWS2P53937 143 aa3.58□□□□□ -1.84
NPL4YBR170C YML018CQ03730 393 aa3.58□□□□□ -1.84
NPL4YBR170C SEC10Q06245 871 aa3.58□□□□□ -1.84
NPL4YBR170C YOR292CQ08743 309 aa3.58□□□□□ -1.84
NPL4YBR170C STH1P32597 1359 aa3.58□□□□□ -1.84
NPL4YBR170C CDC33P07260 213 aaKnown RBP3.58□□□□□ -1.84
NPL4YBR170C CDC50P25656 391 aa3.58□□□□□ -1.84
NPL4YBR170C MRPL10P36520 322 aa3.58□□□□□ -1.84
NPL4YBR170C WSC4P38739 605 aa3.58□□□□□ -1.84
NPL4YBR170C YGL260WP53056 76 aa3.58□□□□□ -1.84
NPL4YBR170C LOA1Q06508 300 aa3.58□□□□□ -1.84
NPL4YBR170C RPL21BQ12672 160 aaKnown RBP3.58□□□□□ -1.84
NPL4YBR170C NCB2Q92317 146 aa3.58□□□□□ -1.84
NPL4YBR170C SEY1Q99287 776 aa3.58□□□□□ -1.84
NPL4YBR170C YAL064W-BO13512 126 aa3.57□□□□□ -1.84
NPL4YBR170C PEX3P28795 441 aa3.57□□□□□ -1.84
NPL4YBR170C CDC13P32797 924 aaKnown RBP3.57□□□□□ -1.84
NPL4YBR170C PRP18P33411 251 aaPredicted RBP3.57□□□□□ -1.84
NPL4YBR170C SOL2P37262 315 aa3.57□□□□□ -1.84
NPL4YBR170C MBA1P38300 278 aa3.57□□□□□ -1.84
NPL4YBR170C STB1P42845 420 aa3.57□□□□□ -1.84
NPL4YBR170C HAM1P47119 197 aaKnown RBP3.57□□□□□ -1.84
NPL4YBR170C YJR079WP47126 109 aa3.57□□□□□ -1.84
NPL4YBR170C HSH155P49955 971 aaKnown RBP3.57□□□□□ -1.84
NPL4YBR170C NBP35P52920 328 aa3.57□□□□□ -1.84
NPL4YBR170C ZRG17P53735 605 aa3.57□□□□□ -1.84
NPL4YBR170C RNH201P53942 307 aa3.57□□□□□ -1.84
NPL4YBR170C ASI3P53983 676 aa3.57□□□□□ -1.84
NPL4YBR170C SNZ1Q03148 297 aa3.57□□□□□ -1.84
NPL4YBR170C VPS60Q03390 229 aa3.57□□□□□ -1.84
NPL4YBR170C MHR1Q06630 226 aa3.57□□□□□ -1.84
NPL4YBR170C GET4Q12125 312 aa3.57□□□□□ -1.84
NPL4YBR170C BGL2P15703 313 aaKnown RBP3.56□□□□□ -1.84
NPL4YBR170C STE18P18852 110 aa3.56□□□□□ -1.84
NPL4YBR170C CBT1P36038 271 aaPredicted RBP3.56□□□□□ -1.84
NPL4YBR170C OM14P38325 134 aa3.56□□□□□ -1.84
NPL4YBR170C URA8P38627 578 aaPredicted RBP3.56□□□□□ -1.84
NPL4YBR170C ERG28P40030 148 aa3.56□□□□□ -1.84
NPL4YBR170C YRB1P41920 201 aaKnown RBP3.56□□□□□ -1.84
NPL4YBR170C USE1P53146 245 aa3.56□□□□□ -1.84
NPL4YBR170C CUS2P53830 285 aaPredicted RBP3.56□□□□□ -1.84
NPL4YBR170C MMT2Q08970 484 aa3.56□□□□□ -1.84
NPL4YBR170C VIK1Q12045 647 aa3.56□□□□□ -1.84
NPL4YBR170C YCT1Q12235 531 aa3.56□□□□□ -1.84
NPL4YBR170C YMR31P19955 123 aa3.56□□□□□ -1.84
NPL4YBR170C RAD51P25454 400 aa3.56□□□□□ -1.84
NPL4YBR170C EHD3P28817 500 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 80.8 ms