RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C DTR1P38125 572 aa11.92□□□□□ -0.5
SSA1YAL005C NVJ1P38881 321 aa11.92□□□□□ -0.5
SSA1YAL005C DDI1P40087 428 aa11.92□□□□□ -0.5
SSA1YAL005C PFS2P42841 465 aaKnown RBP11.92□□□□□ -0.5
SSA1YAL005C BNA6P43619 295 aa11.92□□□□□ -0.5
SSA1YAL005C ABM1P47146 123 aa11.92□□□□□ -0.5
SSA1YAL005C DPB4Q04603 196 aaKnown RBP11.92□□□□□ -0.5
SSA1YAL005C FMP42Q04991 504 aa11.92□□□□□ -0.5
SSA1YAL005C MCM21Q06675 368 aa11.92□□□□□ -0.5
SSA1YAL005C ERG9P29704 444 aa11.92□□□□□ -0.5
SSA1YAL005C MNN5P46982 586 aa11.92□□□□□ -0.5
SSA1YAL005C MSY1P48527 492 aa11.92□□□□□ -0.5
SSA1YAL005C SAY1P53324 424 aa11.92□□□□□ -0.5
SSA1YAL005C BNA7Q04066 261 aa11.92□□□□□ -0.5
SSA1YAL005C MRPL51Q06090 140 aaPredicted RBP11.92□□□□□ -0.5
SSA1YAL005C MIM1Q08176 113 aa11.92□□□□□ -0.5
SSA1YAL005C IES3Q12345 250 aa11.92□□□□□ -0.5
SSA1YAL005C DSF1P0CX08 502 aa11.91□□□□□ -0.5
SSA1YAL005C YNR073CP0CX09 502 aa11.91□□□□□ -0.5
SSA1YAL005C DPB2P24482 689 aaPredicted RBP11.91□□□□□ -0.5
SSA1YAL005C RTC3P38804 111 aaPredicted RBP11.91□□□□□ -0.5
SSA1YAL005C PCL6P40038 420 aa11.91□□□□□ -0.5
SSA1YAL005C SDP1P40479 209 aa11.91□□□□□ -0.5
SSA1YAL005C RPN14P53196 417 aa11.91□□□□□ -0.5
SSA1YAL005C YDL114WQ07530 308 aa11.91□□□□□ -0.5
SSA1YAL005C NIP7Q08962 181 aaKnown RBP11.91□□□□□ -0.5
SSA1YAL005C SFG1Q12507 346 aa11.91□□□□□ -0.5
SSA1YAL005C SBA1P28707 216 aaKnown RBP11.9□□□□□ -0.5
SSA1YAL005C YBR063CP38083 404 aa11.9□□□□□ -0.5
SSA1YAL005C AMN1P38285 549 aaPredicted RBP11.9□□□□□ -0.5
SSA1YAL005C PAM16P42949 149 aa11.9□□□□□ -0.5
SSA1YAL005C SSN8P47821 323 aa11.9□□□□□ -0.5
SSA1YAL005C AIM6Q07716 390 aa11.9□□□□□ -0.5
SSA1YAL005C YOL114CQ12322 202 aa11.9□□□□□ -0.5
SSA1YAL005C YHR214C-EQ8TGK0 99 aa11.9□□□□□ -0.5
SSA1YAL005C RPL24BP24000 155 aaKnown RBP11.9□□□□□ -0.51
SSA1YAL005C PTC6P25646 442 aa11.9□□□□□ -0.51
SSA1YAL005C YPK3P38070 525 aa11.9□□□□□ -0.51
SSA1YAL005C THI2P38141 450 aa11.9□□□□□ -0.51
SSA1YAL005C PTI1P39927 425 aaPredicted RBP11.9□□□□□ -0.51
SSA1YAL005C YER184CP39961 794 aa11.9□□□□□ -0.51
SSA1YAL005C BSC5P53755 489 aa11.9□□□□□ -0.51
SSA1YAL005C YDR102CQ03864 110 aa11.9□□□□□ -0.51
SSA1YAL005C GAS2Q06135 555 aa11.9□□□□□ -0.51
SSA1YAL005C CTS2Q06350 511 aa11.9□□□□□ -0.51
SSA1YAL005C YDL218WQ07629 317 aa11.9□□□□□ -0.51
SSA1YAL005C IPP1P00817 287 aaKnown RBP11.89□□□□□ -0.51
SSA1YAL005C RPS13P05756 151 aaKnown RBP11.89□□□□□ -0.51
SSA1YAL005C SDS22P36047 338 aa11.89□□□□□ -0.51
SSA1YAL005C AIM3P38266 947 aaKnown RBP11.89□□□□□ -0.51
SSA1YAL005C APM1Q00776 475 aaPredicted RBP11.89□□□□□ -0.51
SSA1YAL005C NOG1Q02892 647 aaKnown RBP11.89□□□□□ -0.51
SSA1YAL005C GAL83Q04739 417 aa11.89□□□□□ -0.51
SSA1YAL005C IPK1Q06667 281 aa11.89□□□□□ -0.51
SSA1YAL005C YOR238WQ08634 303 aa11.89□□□□□ -0.51
SSA1YAL005C YPL272CQ08984 517 aa11.89□□□□□ -0.51
SSA1YAL005C CBP6P07253 162 aaPredicted RBP11.88□□□□□ -0.51
SSA1YAL005C YGL041W-AP0C5N3 154 aa11.88□□□□□ -0.51
SSA1YAL005C HMX1P32339 317 aa11.88□□□□□ -0.51
SSA1YAL005C PUB1P32588 453 aaKnown RBP RIP-Chip data11.88□□□□□ -0.51not detected
SSA1YAL005C YNR040WP53736 256 aa11.88□□□□□ -0.51
SSA1YAL005C RBS1Q05672 457 aaKnown RBP11.88□□□□□ -0.51
SSA1YAL005C MEC1P38111 2368 aa11.88□□□□□ -0.51
SSA1YAL005C FUR4P05316 633 aaKnown RBP11.88□□□□□ -0.51
SSA1YAL005C PDE2P06776 526 aa11.88□□□□□ -0.51
SSA1YAL005C STE50P25344 346 aa11.88□□□□□ -0.51
SSA1YAL005C CAM1P29547 415 aaKnown RBP11.88□□□□□ -0.51
SSA1YAL005C SOF1P33750 489 aaKnown RBP11.88□□□□□ -0.51
SSA1YAL005C AGE2P40529 298 aa11.88□□□□□ -0.51
SSA1YAL005C MGR3Q04472 501 aa11.88□□□□□ -0.51
SSA1YAL005C MED4Q12343 284 aa11.88□□□□□ -0.51
SSA1YAL005C PUT3P25502 979 aaPredicted RBP11.87□□□□□ -0.51
SSA1YAL005C POP1P41812 875 aa11.87□□□□□ -0.51
SSA1YAL005C HSV2P50079 448 aaPredicted RBP11.87□□□□□ -0.51
SSA1YAL005C ASI3P53983 676 aa11.87□□□□□ -0.51
SSA1YAL005C KAP120Q02932 1032 aa11.87□□□□□ -0.51
SSA1YAL005C YMR252CQ04814 134 aa11.87□□□□□ -0.51
SSA1YAL005C TY1A-BLQ12266 440 aa11.87□□□□□ -0.51
SSA1YAL005C TY1A-NL1Q12391 440 aaKnown RBP11.87□□□□□ -0.51
SSA1YAL005C STE18P18852 110 aa11.86□□□□□ -0.51
SSA1YAL005C YJL218WP40892 196 aaKnown RBP11.86□□□□□ -0.51
SSA1YAL005C YAE1P47118 141 aaPredicted RBP11.86□□□□□ -0.51
SSA1YAL005C ADO1P47143 340 aaKnown RBP11.86□□□□□ -0.51
SSA1YAL005C PAU12P53343 120 aa11.86□□□□□ -0.51
SSA1YAL005C SOK2P53438 785 aaPredicted RBP11.86□□□□□ -0.51
SSA1YAL005C PLB2Q03674 706 aa11.86□□□□□ -0.51
SSA1YAL005C HRI1Q05905 244 aaKnown RBP11.86□□□□□ -0.51
SSA1YAL005C ACF2Q12168 779 aa11.86□□□□□ -0.51
SSA1YAL005C YEL009C-AA0A023PZF2 135 aa11.86□□□□□ -0.51
SSA1YAL005C BOS1P25385 244 aa11.86□□□□□ -0.51
SSA1YAL005C FUN26P31381 517 aa11.86□□□□□ -0.51
SSA1YAL005C HLR1Q04429 423 aa11.86□□□□□ -0.51
SSA1YAL005C YLR358CO13565 187 aa11.85□□□□□ -0.51
SSA1YAL005C YUH1P35127 236 aa11.85□□□□□ -0.51
SSA1YAL005C GPX2P38143 162 aa11.85□□□□□ -0.51
SSA1YAL005C MKC7P53379 596 aa11.85□□□□□ -0.51
SSA1YAL005C COQ11Q05892 277 aa11.85□□□□□ -0.51
SSA1YAL005C YPR1Q12458 312 aa11.85□□□□□ -0.51
SSA1YAL005C FRE6Q12473 712 aa11.85□□□□□ -0.51
SSA1YAL005C PAU24P38155 120 aa11.84□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms