RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 ISU2Q12056 156 aa7.89□□□□□ -1.15
LSR1LSR1 RTC5Q12108 567 aaKnown RBP7.89□□□□□ -1.15
LSR1LSR1 TRM13Q12383 476 aa7.89□□□□□ -1.15
LSR1LSR1 NPC2Q12408 173 aa7.89□□□□□ -1.15
LSR1LSR1 YOS9Q99220 542 aa7.89□□□□□ -1.15
LSR1LSR1 PUT1P09368 476 aa7.88□□□□□ -1.15
LSR1LSR1 SAC7P17121 654 aa7.88□□□□□ -1.15
LSR1LSR1 NAM9P27929 486 aa7.88□□□□□ -1.15
LSR1LSR1 PMT2P31382 759 aa7.88□□□□□ -1.15
LSR1LSR1 MRT4P33201 236 aaKnown RBP7.88□□□□□ -1.15
LSR1LSR1 ECM31P38122 312 aa7.88□□□□□ -1.15
LSR1LSR1 SDS24P38314 527 aa7.88□□□□□ -1.15
LSR1LSR1 YBR238CP38330 731 aaKnown RBP7.88□□□□□ -1.15
LSR1LSR1 OCA5P38738 679 aa7.88□□□□□ -1.15
LSR1LSR1 SLI1P53304 468 aa7.88□□□□□ -1.15
LSR1LSR1 INN1P53901 409 aa7.88□□□□□ -1.15
LSR1LSR1 YLR352WQ06479 807 aa7.88□□□□□ -1.15
LSR1LSR1 YPR172WQ06608 200 aa7.88□□□□□ -1.15
LSR1LSR1 AIM6Q07716 390 aa7.88□□□□□ -1.15
LSR1LSR1 RSC58Q07979 502 aa7.88□□□□□ -1.15
LSR1LSR1 ZEO1Q08245 113 aa7.88□□□□□ -1.15
LSR1LSR1 FMP40Q08968 688 aaPredicted RBP7.88□□□□□ -1.15
LSR1LSR1 CYR1P08678 2026 aaKnown RBP7.88□□□□□ -1.15
LSR1LSR1 TDH1P00360 332 aaKnown RBP7.87□□□□□ -1.15
LSR1LSR1 FUS1P11710 512 aa7.87□□□□□ -1.15
LSR1LSR1 GPI12P23797 304 aa7.87□□□□□ -1.15
LSR1LSR1 PTP1P25044 335 aa7.87□□□□□ -1.15
LSR1LSR1 YCR061WP25639 631 aa7.87□□□□□ -1.15
LSR1LSR1 IMG2P25642 146 aaPredicted RBP7.87□□□□□ -1.15
LSR1LSR1 MRP17P28778 131 aa7.87□□□□□ -1.15
LSR1LSR1 LDS1P31379 325 aa7.87□□□□□ -1.15
LSR1LSR1 MDH3P32419 343 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
LSR1LSR1 YKL071WP36086 256 aa7.87□□□□□ -1.15
LSR1LSR1 MRPL36P36531 177 aa7.87□□□□□ -1.15
LSR1LSR1 CHK1P38147 527 aa7.87□□□□□ -1.15
LSR1LSR1 PHB1P40961 287 aa7.87□□□□□ -1.15
LSR1LSR1 GLR1P41921 483 aaKnown RBP7.87□□□□□ -1.15
LSR1LSR1 HHO1P53551 258 aa7.87□□□□□ -1.15
LSR1LSR1 LUC7Q07508 261 aaPredicted RBP7.87□□□□□ -1.15
LSR1LSR1 YOR378WQ08902 515 aa7.87□□□□□ -1.15
LSR1LSR1 YOR385WQ08909 290 aa7.87□□□□□ -1.15
LSR1LSR1 GUP2Q08929 609 aa7.87□□□□□ -1.15
LSR1LSR1 RPL20AP0CX23 172 aaKnown RBP7.86□□□□□ -1.15
LSR1LSR1 RPL20BP0CX24 172 aaPredicted RBP7.86□□□□□ -1.15
LSR1LSR1 HOM3P10869 527 aa7.86□□□□□ -1.15
LSR1LSR1 ISC10P32645 267 aa7.86□□□□□ -1.15
LSR1LSR1 SRY1P36007 326 aa7.86□□□□□ -1.15
LSR1LSR1 VPS51P36116 164 aa7.86□□□□□ -1.15
LSR1LSR1 CHS7P38843 316 aa7.86□□□□□ -1.15
LSR1LSR1 PHO90P39535 881 aa7.86□□□□□ -1.15
LSR1LSR1 SSO2P39926 295 aa7.86□□□□□ -1.15
LSR1LSR1 TIF34P40217 347 aaKnown RBP7.86□□□□□ -1.15
LSR1LSR1 BMT5P40493 336 aa7.86□□□□□ -1.15
LSR1LSR1 YIL060WP40519 144 aa7.86□□□□□ -1.15
LSR1LSR1 SLS1P42900 643 aa7.86□□□□□ -1.15
LSR1LSR1 SAM37P50110 327 aa7.86□□□□□ -1.15
LSR1LSR1 CGR1P53188 120 aa7.86□□□□□ -1.15
LSR1LSR1 LAP3Q01532 483 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
LSR1LSR1 CYT1P07143 309 aa7.85□□□□□ -1.15
LSR1LSR1 PRB1P09232 635 aa7.85□□□□□ -1.15
LSR1LSR1 MRPL33P20084 86 aa7.85□□□□□ -1.15
LSR1LSR1 PBN1P25580 416 aa7.85□□□□□ -1.15
LSR1LSR1 EMP24P32803 203 aaKnown RBP7.85□□□□□ -1.15
LSR1LSR1 BET3P36149 193 aa7.85□□□□□ -1.15
LSR1LSR1 VBA2P38358 474 aaKnown RBP7.85□□□□□ -1.15
LSR1LSR1 BAT1P38891 393 aaKnown RBP7.85□□□□□ -1.15
LSR1LSR1 SMB1P40018 196 aaKnown RBP7.85□□□□□ -1.15
LSR1LSR1 UBX6P47049 396 aa7.85□□□□□ -1.15
LSR1LSR1 TYW3P53177 273 aa7.85□□□□□ -1.15
LSR1LSR1 YGR042WP53227 271 aa7.85□□□□□ -1.15
LSR1LSR1 YNR014WP53719 212 aa7.85□□□□□ -1.15
LSR1LSR1 MPP6P53725 186 aaPredicted RBP7.85□□□□□ -1.15
LSR1LSR1 BUD25P85052 153 aa7.85□□□□□ -1.15
LSR1LSR1 NAM8Q00539 523 aaKnown RBP7.85□□□□□ -1.15
LSR1LSR1 SPR28Q04921 423 aa7.85□□□□□ -1.15
LSR1LSR1 DCS1Q06151 350 aa7.85□□□□□ -1.15
LSR1LSR1 AVO1Q08236 1176 aa7.85□□□□□ -1.15
LSR1LSR1 HRT1Q08273 121 aa7.85□□□□□ -1.15
LSR1LSR1 YRM1Q12340 786 aa7.85□□□□□ -1.15
LSR1LSR1 SET6Q12529 373 aa7.85□□□□□ -1.15
LSR1LSR1 COQ2P32378 372 aa7.84□□□□□ -1.15
LSR1LSR1 TRS65P32893 560 aa7.84□□□□□ -1.15
LSR1LSR1 PAD1P33751 242 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
LSR1LSR1 FLO10P36170 1169 aa7.84□□□□□ -1.15
LSR1LSR1 UTP25P40498 721 aaKnown RBP7.84□□□□□ -1.15
LSR1LSR1 OTU1P43558 301 aa7.84□□□□□ -1.15
LSR1LSR1 TAD2P47058 250 aa7.84□□□□□ -1.15
LSR1LSR1 CCC1P47818 322 aa7.84□□□□□ -1.15
LSR1LSR1 SRB7P47822 140 aa7.84□□□□□ -1.15
LSR1LSR1 MNN10P50108 393 aaKnown RBP7.84□□□□□ -1.15
LSR1LSR1 NRK1P53915 240 aa7.84□□□□□ -1.15
LSR1LSR1 ERG13P54839 491 aaKnown RBP7.84□□□□□ -1.15
LSR1LSR1 EGD1Q02642 157 aaKnown RBP7.84□□□□□ -1.15
LSR1LSR1 NCE101Q02820 53 aa7.84□□□□□ -1.15
LSR1LSR1 ANT1Q06497 328 aa7.84□□□□□ -1.15
LSR1LSR1 YPR174CQ06616 221 aaPredicted RBP7.84□□□□□ -1.15
LSR1LSR1 RDR1Q08904 546 aa7.84□□□□□ -1.15
LSR1LSR1 CHO1P08456 276 aa7.83□□□□□ -1.16
LSR1LSR1 GAS1P22146 559 aaKnown RBP7.83□□□□□ -1.16
LSR1LSR1 NFS1P25374 497 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms