RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 LRIT3Q3SXY7 679 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 ZC2HC1CQ53FD0 456 aaPredicted RBP20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 ZPBP2Q6X784 338 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 ECHDC2Q86YB7 292 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 ELOA2Q8IYF1 753 aaPredicted RBP20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 HACE1Q8IYU2 909 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 RNF169Q8NCN4 708 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 ACCSQ96QU6 501 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 ACO2Q99798 780 aaKnown RBP20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 TARS2Q9BW92 718 aaKnown RBP20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 PDZD7Q9H5P4 517 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 ELAC1Q9H777 363 aaKnown RBP20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 EXOC7Q9UPT5 735 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 TNFSF13BQ9Y275 285 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 USP20Q9Y2K6 914 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 PCDHB2Q9Y5E7 798 aa20.97■□□□□ 0.95
SQSTM1-216ENST00000626660 TTLL13PA6NNM8 815 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 KLRC4O43908 158 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 GJB5O95377 273 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 NPTXRO95502 500 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 EOMESO95936 686 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 EDN1P05305 212 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 LIG4P49917 911 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 PSMD2Q13200 908 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 DCAF4L1Q3SXM0 396 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 KMT5BQ4FZB7 885 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 UBXN11Q5T124 520 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 TMCO2Q7Z6W1 182 aaPredicted RBP20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 CDR2LQ86X02 465 aaPredicted RBP20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 MAP4K3Q8IVH8 894 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 PGBD4Q96DM1 585 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 LRCH3Q96II8 777 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 TCHPQ9BT92 498 aa20.96■□□□□ 0.95
SQSTM1-216ENST00000626660 GBF1Q92538 1859 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 HNRNPDLO14979 420 aaKnown RBP20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 EIF3DO15371 548 aaKnown RBP eCLIP20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 HOXA2O43364 376 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 TLL1O43897 1013 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 ZNF623O75123 536 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 PPP1R37O75864 691 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 MYBP10242 640 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 MATR3P43243 847 aaKnown RBP eCLIP20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 EHHADHQ08426 723 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 RAB30Q15771 203 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 ZNF568Q3ZCX4 644 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 L1TD1Q5T7N2 865 aaKnown RBP20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 FAM109BQ6ICB4 259 aaPredicted RBP20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 HPS3Q969F9 1004 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 SMARCE1Q969G3 411 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 YME1L1Q96TA2 773 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 EIF2AQ9BY44 585 aaKnown RBP20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 RMND1Q9NWS8 449 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 MSRAQ9UJ68 235 aa20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 RANBP2P49792 3224 aaKnown RBP20.95■□□□□ 0.94
SQSTM1-216ENST00000626660 GRXCR1A8MXD5 290 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 SOX1O00570 391 aaPredicted RBP20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 TOM1L1O75674 476 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 CASP5P51878 434 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 SMAD3P84022 425 aaKnown RBP20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 KCNB1Q14721 858 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 EEF1DP3Q658K8 133 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 MPZL3Q6UWV2 235 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 SYCP3Q8IZU3 236 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 RAD9AQ99638 391 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 STRA6Q9BX79 667 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 SLC39A2Q9NP94 309 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 ANKFY1Q9P2R3 1169 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 INSL6Q9Y581 213 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 PCDHA11Q9Y5I1 949 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 UBE4BO95155 1302 aa20.94■□□□□ 0.94
SQSTM1-216ENST00000626660 PRPF6O94906 941 aaKnown RBP20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 RHOBTB3O94955 611 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 PIGRP01833 764 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 ITGA4P13612 1032 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 RABGGTBP53611 331 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 MRPL10Q7Z7H8 261 aaKnown RBP20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 ZNF598Q86UK7 904 aaKnown RBP20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 ABI1Q8IZP0 508 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 CRIPAKQ8N1N5 446 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 GSDMAQ96QA5 445 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 FGFBP2Q9BYJ0 223 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 TMEM206Q9H813 350 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 IPPQ9Y573 584 aa20.93■□□□□ 0.94
SQSTM1-216ENST00000626660 CLDN3O15551 220 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 MBD3O95983 291 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 MCF2P10911 925 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 ATF7P17544 494 aaPredicted RBP20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 MCM4P33991 863 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 ZBTB33Q86T24 672 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 APOL6Q9BWW8 343 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 GTPBP4Q9BZE4 634 aaKnown RBP20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 CDT1Q9H211 546 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 PTPRHQ9HD43 1115 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 UBN1Q9NPG3 1134 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 PCDHA5Q9Y5H7 936 aa20.92■□□□□ 0.94
SQSTM1-216ENST00000626660 DGKIO75912 1065 aa20.91■□□□□ 0.94
SQSTM1-216ENST00000626660 KIF20AO95235 890 aa20.91■□□□□ 0.94
SQSTM1-216ENST00000626660 FGFR1P11362 822 aa20.91■□□□□ 0.94
SQSTM1-216ENST00000626660 HARSP12081 509 aaKnown RBP20.91■□□□□ 0.94
SQSTM1-216ENST00000626660 PROZP22891 400 aa20.91■□□□□ 0.94
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