RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CACNA1IQ9P0X4 2223 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 GBP2P32456 591 aaPredicted RBP26.21■■□□□ 1.79
MMP28-203ENST00000612672 TOB2Q14106 344 aaPredicted RBP26.21■■□□□ 1.79
MMP28-203ENST00000612672 INF2Q27J81 1249 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 ERMP1Q7Z2K6 904 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 SLC44A3Q8N4M1 653 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 RIN2Q8WYP3 895 aaPredicted RBP26.21■■□□□ 1.79
MMP28-203ENST00000612672 FAM193BQ96PV7 902 aaPredicted RBP26.21■■□□□ 1.79
MMP28-203ENST00000612672 RXFP1Q9HBX9 757 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 EPS15L1Q9UBC2 864 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 DDX25Q9UHL0 483 aaKnown RBP26.21■■□□□ 1.79
MMP28-203ENST00000612672 HES2Q9Y543 173 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 IPPQ9Y573 584 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 NCOR2Q9Y618 2525 aa26.21■■□□□ 1.79
MMP28-203ENST00000612672 ZBTB39O15060 712 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 MLH1P40692 756 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 OR1G1P47890 313 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 QARSP47897 775 aaKnown RBP26.2■■□□□ 1.78
MMP28-203ENST00000612672 DSC1Q08554 894 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 PPP2R5CQ13362 524 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 MOXD1Q6UVY6 613 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 SRGAP1Q7Z6B7 1085 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 DAGLBQ8NCG7 672 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 CEP170P1Q96L14 293 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 ZFP42Q96MM3 310 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 GAD1Q99259 594 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 KCNMB3Q9NPA1 279 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 WNT16Q9UBV4 365 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 GPR179Q6PRD1 2367 aa26.2■■□□□ 1.78
MMP28-203ENST00000612672 ARL5CA6NH57 179 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 PAPLNO95428 1278 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 GLUD1P00367 558 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 GLUD2P49448 558 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 SCNN1GP51170 649 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 PSPC1Q8WXF1 523 aaKnown RBP26.19■■□□□ 1.78
MMP28-203ENST00000612672 CPB2Q96IY4 423 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 JPH2Q9BR39 696 aaPredicted RBP26.19■■□□□ 1.78
MMP28-203ENST00000612672 LARP6Q9BRS8 491 aaKnown RBP26.19■■□□□ 1.78
MMP28-203ENST00000612672 RHOBTB2Q9BYZ6 727 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 TBC1D17Q9HA65 648 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 KANSL3Q9P2N6 904 aa26.19■■□□□ 1.78
MMP28-203ENST00000612672 TSPAN1O60635 241 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 DTNBO60941 627 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 ADH1AP07327 375 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 DSG1Q02413 1049 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 RNF149Q8NC42 400 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 GPR152Q8TDT2 470 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 SLC7A3Q8WY07 619 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 SMG7Q92540 1137 aaKnown RBP26.18■■□□□ 1.78
MMP28-203ENST00000612672 XPNPEP1Q9NQW7 623 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 DLGAP2Q9P1A6 1054 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 STK39Q9UEW8 545 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 MIA3Q5JRA6 1907 aa26.18■■□□□ 1.78
MMP28-203ENST00000612672 DCNP07585 359 aaKnown RBP26.17■■□□□ 1.78
MMP28-203ENST00000612672 ITGA4P13612 1032 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 EMC2Q15006 297 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 FERMT3Q86UX7 667 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 PALB2Q86YC2 1186 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 HAS1Q92839 578 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 RMDN1Q96DB5 314 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 C22orf23Q9BZE7 217 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 CHST7Q9NS84 486 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 RGL1Q9NZL6 768 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 CACNG4Q9UBN1 327 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 KCNJ14Q9UNX9 436 aa26.17■■□□□ 1.78
MMP28-203ENST00000612672 PATJQ8NI35 1801 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 STK25O00506 426 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 SRFP11831 508 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 RPL17P18621 184 aaKnown RBP26.16■■□□□ 1.78
MMP28-203ENST00000612672 SSRP1Q08945 709 aaKnown RBP26.16■■□□□ 1.78
MMP28-203ENST00000612672 NONOQ15233 471 aaKnown RBP eCLIP26.16■■□□□ 1.78
MMP28-203ENST00000612672 SPECC1Q5M775 1068 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 GLYCTKQ8IVS8 523 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 GSTCDQ8NEC7 633 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 RABGGTAQ92696 567 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 LXNQ9BS40 222 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 GPR62Q9BZJ7 368 aa26.16■■□□□ 1.78
MMP28-203ENST00000612672 POTEMA6NI47 508 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 TGM5O43548 720 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 GLULP15104 373 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 HTR4Q13639 388 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 AMHR2Q16671 573 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 GET4Q7L5D6 327 aaPredicted RBP26.15■■□□□ 1.78
MMP28-203ENST00000612672 APOL6Q9BWW8 343 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 NT5C3AQ9H0P0 336 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 NXF3Q9H4D5 531 aaKnown RBP26.15■■□□□ 1.78
MMP28-203ENST00000612672 VWA8A3KMH1 1905 aa26.15■■□□□ 1.78
MMP28-203ENST00000612672 MED19A0JLT2 244 aaPredicted RBP26.14■■□□□ 1.78
MMP28-203ENST00000612672 LRRN2O75325 713 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 DEXIO95424 95 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 P4HBP07237 508 aaKnown RBP26.14■■□□□ 1.78
MMP28-203ENST00000612672 YWHABP31946 246 aaKnown RBP26.14■■□□□ 1.78
MMP28-203ENST00000612672 RFC5P40937 340 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 SPIRE1Q08AE8 756 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 LILRA6Q6PI73 481 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 DYDC2Q96IM9 177 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 RPP25Q9BUL9 199 aaKnown RBP26.14■■□□□ 1.78
MMP28-203ENST00000612672 FOXQ1Q9C009 403 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 GJB4Q9NTQ9 266 aa26.14■■□□□ 1.78
MMP28-203ENST00000612672 NOTCH4Q99466 2003 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms