RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ANKEF1Q9NU02 776 aa20.05■□□□□ 0.8
CHMP2A-208ENST00000601220 STK39Q9UEW8 545 aa20.05■□□□□ 0.8
CHMP2A-208ENST00000601220 PCDHA12Q9UN75 941 aa20.05■□□□□ 0.8
CHMP2A-208ENST00000601220 USTQ9Y2C2 406 aa20.05■□□□□ 0.8
CHMP2A-208ENST00000601220 AXLP30530 894 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 MBTD1Q05BQ5 628 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 DSC1Q08554 894 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 TMC5Q6UXY8 1006 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 GPR149Q86SP6 731 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 ZBTB33Q86T24 672 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 CABP7Q86V35 215 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 CPB2Q96IY4 423 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 UBN1Q9NPG3 1134 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 HES2Q9Y543 173 aa20.04■□□□□ 0.8
CHMP2A-208ENST00000601220 ARL5CA6NH57 179 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 SOD2P04179 222 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 SSBP05455 408 aaKnown RBP eCLIP20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 ASGR2P07307 311 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 ITGA4P13612 1032 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 GLRA2P23416 452 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 MTMR3Q13615 1198 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 CAPSQ13938 189 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 CALCRLQ16602 461 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 TMEM87AQ8NBN3 555 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 GSTCDQ8NEC7 633 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 CCDC51Q96ER9 411 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 FAM193BQ96PV7 902 aaPredicted RBP20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 GAD1Q99259 594 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 EMILIN2Q9BXX0 1053 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 NFKBIZQ9BYH8 718 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 CSRNP2Q9H175 543 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 TTC12Q9H892 705 aaPredicted RBP20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 LIMD1Q9UGP4 676 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 KMT2EQ8IZD2 1858 aa20.03■□□□□ 0.8
CHMP2A-208ENST00000601220 A0A087WWV3 80 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 JAK2O60674 1132 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 DGAT1O75907 488 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 ERLIN2O94905 339 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 ARF4P18085 180 aaPredicted RBP20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 KLRC2P26717 231 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 RARRES1P49788 294 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 ST3GAL1Q11201 340 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 KIAA0319Q5VV43 1072 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 NOTUMQ6P988 496 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 TDRD5Q8NAT2 981 aaKnown RBP20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 HERC2P3Q9BVR0 1158 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 SFXN1Q9H9B4 322 aa20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 MRPL17Q9NRX2 175 aaKnown RBP20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 DBR1Q9UK59 544 aaKnown RBP20.02■□□□□ 0.8
CHMP2A-208ENST00000601220 F8W810 466 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 INO80B-WBP1J3KQ70 363 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 SPATA31C1P0DKV0 1188 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 XRCC6P12956 609 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 MLH1P40692 756 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 DIS3L2Q8IYB7 885 aaKnown RBP20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 PLCD3Q8N3E9 789 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 PIGOQ8TEQ8 1089 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 ZFP42Q96MM3 310 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 RPS6KC1Q96S38 1066 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 TMEM60Q9H2L4 133 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 RXFP1Q9HBX9 757 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 BRMS1Q9HCU9 246 aa20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 PRG3Q9Y2Y8 225 aaPredicted RBP20.01■□□□□ 0.79
CHMP2A-208ENST00000601220 TEX28O15482 410 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 B4GALT5O43286 388 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 PAPLNO95428 1278 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 TXKP42681 527 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 SCNN1GP51170 649 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 NUBP1P53384 320 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 TFDP1Q14186 410 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 CMASQ8NFW8 434 aaPredicted RBP20■□□□□ 0.79
CHMP2A-208ENST00000601220 CHST7Q9NS84 486 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 GIT1Q9Y2X7 761 aa20■□□□□ 0.79
CHMP2A-208ENST00000601220 A0A1B0GUA9 196 aa19.99■□□□□ 0.79
CHMP2A-208ENST00000601220 NEMFO60524 1076 aa19.99■□□□□ 0.79
CHMP2A-208ENST00000601220 OR1G1P47890 313 aa19.99■□□□□ 0.79
CHMP2A-208ENST00000601220 C15orf39Q6ZRI6 1047 aa19.99■□□□□ 0.79
CHMP2A-208ENST00000601220 POLR3FQ9H1D9 316 aaPredicted RBP19.99■□□□□ 0.79
CHMP2A-208ENST00000601220 NXF3Q9H4D5 531 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-208ENST00000601220 USP34Q70CQ2 3546 aa19.99■□□□□ 0.79
CHMP2A-208ENST00000601220 POTEMA6NI47 508 aa19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 C2CD2LO14523 706 aa19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 DSG1Q02413 1049 aa19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 CDR2LQ86X02 465 aaPredicted RBP19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 CATSPER3Q86XQ3 398 aa19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 TMEM105Q8N8V8 129 aa19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 RHOBTB2Q9BYZ6 727 aa19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 GPRC5CQ9NQ84 441 aa19.98■□□□□ 0.79
CHMP2A-208ENST00000601220 ARID2Q68CP9 1835 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 N4BP1O75113 896 aaKnown RBP19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 URODP06132 367 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 AKAP5P24588 427 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 FOSBP53539 338 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 NCBP1Q09161 790 aaKnown RBP19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 CCDC149Q6ZUS6 474 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 OTOP3Q7RTS5 596 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 APOL6Q9BWW8 343 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 GPR62Q9BZJ7 368 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 FZD8Q9H461 694 aa19.97■□□□□ 0.79
CHMP2A-208ENST00000601220 MAN1C1Q9NR34 630 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms