RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 APOL6Q9BWW8 343 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 SENP1Q9P0U3 644 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 COL12A1Q99715 3063 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ZBTB5O15062 677 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 GTPBP6O43824 516 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 VPS41P49754 854 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TRIP13Q15645 432 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 LDHDQ86WU2 507 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ZNF577Q9BSK1 485 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 BEGAINQ9BUH8 593 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SPDYE2BA6NHP3 402 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 DDX3XO00571 662 aaKnown RBP eCLIP3.6□□□□□ -1.83
CHD9-213ENST00000564845 MSH4O15457 936 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CTIFO43310 598 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 SPDYE6P0CI01 402 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 AP3M2P53677 418 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 BAATQ14032 418 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 MAP7D1Q3KQU3 841 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 FOXR1Q6PIV2 292 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 IFT81Q8WYA0 676 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 RAB17Q9H0T7 212 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ATP6V0A4Q9HBG4 840 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SAE1Q9UBE0 346 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 GGT7Q9UJ14 662 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ANKRD31Q8N7Z5 1873 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MYH7P12883 1935 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CUTAO60888 179 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 PPATQ06203 517 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 NBPF20Q3BBV1 942 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ZNF772Q68DY9 489 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.6□□□□□ -1.83
CHD9-213ENST00000564845 G3BP2Q9UN86 482 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.6□□□□□ -1.83
CHD9-213ENST00000564845 LOC102724159A0A0B4J2E5 919 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SNTNA6NMZ2 147 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SPECC1L-ADORA2AF8WAN1 911 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ZEB2O60315 1214 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TBC1D12O60347 775 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 EDN1P05305 212 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 BMP3P12645 472 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 GCLMP48507 274 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 RPS6P62753 249 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 SNX1Q13596 522 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 PWP2Q15269 919 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 SWSAP1Q6NVH7 229 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 NIM1KQ8IY84 436 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 NRBF2Q96F24 287 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 THOC1Q96FV9 657 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 EVA1BQ9NVM1 165 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 FBXO40Q9UH90 709 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 FRMD4BQ9Y2L6 1034 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TTLL8A6PVC2 850 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SCAMP3O14828 347 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 KLRC4O43908 158 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SARSP49591 514 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 KCNMA1Q12791 1236 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 COASYQ13057 564 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CCDC40Q4G0X9 1142 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SLC27A3Q5K4L6 730 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 RC3H1Q5TC82 1133 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 NYAP1Q6ZVC0 841 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TAX1BP1Q86VP1 789 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 NHEJ1Q9H9Q4 299 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 PIH1D1Q9NWS0 290 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 PI4KBQ9UBF8 816 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 REXO2Q9Y3B8 237 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 HES2Q9Y543 173 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 GFPT2O94808 682 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ATP5BP06576 529 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 CTNNA2P26232 953 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 PBX1P40424 430 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 VAV2P52735 878 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ARHGAP4P98171 946 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 GABPAQ06546 454 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SETDB1Q15047 1291 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 GPR162Q16538 588 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 KLHL7Q8IXQ5 586 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TMEM192Q8IY95 271 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 BBS5Q8N3I7 341 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SH3TC2Q8TF17 1288 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 RPS6KC1Q96S38 1066 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 EIF2AK1Q9BQI3 630 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 CBWD1Q9BRT8 395 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CELF4Q9BZC1 486 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 PRM3Q9NNZ6 103 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MPP6Q9NZW5 540 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 EPS15L1Q9UBC2 864 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ENOPH1Q9UHY7 261 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ANAPC4Q9UJX5 808 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MAPRE3Q9UPY8 281 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CSADQ9Y600 493 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 DCDC2CA8MYV0 355 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 BBOX1O75936 387 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SLFN14P0C7P3 912 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SRGAP2BP0DMP2 458 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 GNAT1P11488 350 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CD58P19256 250 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TMOD1P28289 359 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 BAG6P46379 1132 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms