RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCAT1-202ENST00000561978 STRA6Q9BX79 667 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 HMX1Q9NP08 348 aaPredicted RBP12.63□□□□□ -0.39
PCAT1-202ENST00000561978 PXMP2Q9NR77 195 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 SNX12Q9UMY4 172 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 ASB14A6NK59 587 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCAT1-202ENST00000561978 SLC9A1P19634 815 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 CCND2P30279 289 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 CASP4P49662 377 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 KCNA1Q09470 495 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 ITGB3BPQ13352 177 aaPredicted RBP12.63□□□□□ -0.39
PCAT1-202ENST00000561978 ZC2HC1CQ53FD0 456 aaPredicted RBP12.63□□□□□ -0.39
PCAT1-202ENST00000561978 CCDC70Q6NSX1 233 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 NLRX1Q86UT6 975 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 IL31RAQ8NI17 732 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 CAGE1Q8TC20 777 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 NSUN6Q8TEA1 469 aaKnown RBP12.63□□□□□ -0.39
PCAT1-202ENST00000561978 PDCD2LQ9BRP1 358 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCAT1-202ENST00000561978 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 AGPAT3Q9NRZ7 376 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 ANKEF1Q9NU02 776 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 HDAC6Q9UBN7 1215 aa12.63□□□□□ -0.39
PCAT1-202ENST00000561978 ZMYM2Q9UBW7 1377 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 MOCS3O95396 460 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
PCAT1-202ENST00000561978 MYCLP12524 364 aaPredicted RBP12.62□□□□□ -0.39
PCAT1-202ENST00000561978 PLS3P13797 630 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 PRKCIP41743 596 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 RARRES1P49788 294 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 SOX10P56693 466 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 PSMC5P62195 406 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 ITIH3Q06033 890 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 ACVR2BQ13705 512 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 WDR93Q6P2C0 686 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
PCAT1-202ENST00000561978 LENG1Q96BZ8 264 aaPredicted RBP12.62□□□□□ -0.39
PCAT1-202ENST00000561978 GPRASP2Q96D09 838 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 DRC1Q96MC2 740 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 ACCSQ96QU6 501 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 ABHD16BQ9H3Z7 469 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 PAK6Q9NQU5 681 aaPredicted RBP12.62□□□□□ -0.39
PCAT1-202ENST00000561978 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
PCAT1-202ENST00000561978 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
PCAT1-202ENST00000561978 BTNL10A8MVZ5 291 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 PPP1R37O75864 691 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 GFPT2O94808 682 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 CCDC172P0C7W6 258 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 YWHABP31946 246 aaKnown RBP12.61□□□□□ -0.39
PCAT1-202ENST00000561978 NAP1L1P55209 391 aaKnown RBP12.61□□□□□ -0.39
PCAT1-202ENST00000561978 GABPB1Q06547 395 aaPredicted RBP12.61□□□□□ -0.39
PCAT1-202ENST00000561978 MAPK7Q13164 816 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 NAB2Q15742 525 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 IFI16Q16666 785 aaKnown RBP12.61□□□□□ -0.39
PCAT1-202ENST00000561978 ZNF746Q6NUN9 644 aaPredicted RBP12.61□□□□□ -0.39
PCAT1-202ENST00000561978 DPY19L2P1Q6NXN4 242 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 CDHR1Q96JP9 859 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 SENP7Q9BQF6 1050 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 KATNBL1Q9H079 304 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 ST6GALNAC4Q9H4F1 302 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 PKD2L1Q9P0L9 805 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 HYOU1Q9Y4L1 999 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 MYH11P35749 1972 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 K7ENM7 598 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 ADCY6O43306 1168 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 EXOC3O60645 756 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 STAM2O75886 525 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 NR3C2P08235 984 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 RHOXF2BP0C7M4 288 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 ACTN1P12814 892 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 KRT13P13646 458 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 FERP16591 822 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 EDNRBP24530 442 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 FMO5P49326 533 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 ARID5AQ03989 594 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 CETN1Q12798 172 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 LONRF2Q1L5Z9 754 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 TMEM63BQ5T3F8 832 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 OTUD6AQ7L8S5 288 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 VSIG10LQ86VR7 867 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 C12orf56Q8IXR9 622 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 DAW1Q8N136 415 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 VTI1AQ96AJ9 217 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 RHOXF2Q9BQY4 288 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 BCAS3Q9H6U6 928 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 CAPN6Q9Y6Q1 641 aa12.61□□□□□ -0.39
PCAT1-202ENST00000561978 LRRC37A2A6NM11 1700 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms