RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TPH2Q8IWU9 490 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 KLHL23Q8NBE8 558 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 CCDC112Q8NEF3 446 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 SLC7A3Q8WY07 619 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 TMEM143Q96AN5 459 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 C16orf45Q96MC5 204 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 NLRP4Q96MN2 994 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 NECAB3Q96P71 396 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 UHRF1Q96T88 793 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 HSD17B14Q9BPX1 270 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 JPH2Q9BR39 696 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 PYM1Q9BRP8 204 aaKnown RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 RAB34Q9BZG1 259 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 CCSER1Q9C0I3 900 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 LMAN2LQ9H0V9 348 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 NSUN3Q9H649 340 aaKnown RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 ZSWIM4Q9H7M6 989 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 PLAGL2Q9UPG8 496 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 MYO7AQ13402 2215 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 ATF7P17544 494 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 POLGP54098 1239 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 CDC42EP1Q00587 391 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 XKR9Q5GH70 373 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 USP49Q70CQ1 688 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 ZNF598Q86UK7 904 aaKnown RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 ZNF410Q86VK4 478 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 ECHDC2Q86YB7 292 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 CCAR2Q8N163 923 aaKnown RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 PDCL2Q8N4E4 241 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 SPPL3Q8TCT6 385 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 PRPF31Q8WWY3 499 aaKnown RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 CASD1Q96PB1 797 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 CWH43Q9H720 699 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 IFT122Q9HBG6 1241 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 TYW1Q9NV66 732 aaKnown RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
TPM1-212ENST00000558347 PPME1Q9Y570 386 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 COL4A3BPQ9Y5P4 624 aa11.35□□□□□ -0.59
TPM1-212ENST00000558347 A0A087WWV3 80 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 A0A0U1RQF3 1178 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 TNFRSF10AO00220 468 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 SLC26A4O43511 780 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 LYPLA2O95372 231 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 KCNA5P22460 613 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 IRS1P35568 1242 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 TXLNAP40222 546 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 RFC5P40937 340 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 MYL5Q02045 173 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 COL19A1Q14993 1142 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 EMC2Q15006 297 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 NAALADL2Q58DX5 795 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 CLLU1OSQ5K130 101 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 SPOUT1Q5T280 376 aaKnown RBP11.34□□□□□ -0.59
TPM1-212ENST00000558347 LRRC55Q6ZSA7 311 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 OTUD6AQ7L8S5 288 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 FILIP1Q7Z7B0 1213 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 RNF169Q8NCN4 708 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.34□□□□□ -0.59
TPM1-212ENST00000558347 EPSTI1Q96J88 318 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
TPM1-212ENST00000558347 TMEM117Q9H0C3 514 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 MINDY3Q9H8M7 445 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 XPNPEP1Q9NQW7 623 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 IFNKQ9P0W0 207 aa11.34□□□□□ -0.59
TPM1-212ENST00000558347 C5orf42Q9H799 3197 aa11.33□□□□□ -0.59
TPM1-212ENST00000558347 SMC2O95347 1197 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 SRGAP2CP0DJJ0 459 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM1-212ENST00000558347 UBA7P41226 1012 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 TECP42680 631 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 FANCCQ00597 558 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 LAMTOR4Q0VGL1 99 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 HYAL1Q12794 435 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 LEXMQ3ZCV2 418 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 CT47A1Q5JQC4 288 aaPredicted RBP11.33□□□□□ -0.6
TPM1-212ENST00000558347 KANK3Q6NY19 840 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 KRBA2Q6ZNG9 492 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 ADGRD2Q7Z7M1 963 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 EXOC8Q8IYI6 725 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 TRIML1Q8N9V2 468 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 COLGALT1Q8NBJ5 622 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 NEK9Q8TD19 979 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 PIGOQ8TEQ8 1089 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 PSPC1Q8WXF1 523 aaKnown RBP11.33□□□□□ -0.6
TPM1-212ENST00000558347 MTRQ99707 1265 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 INO80BQ9C086 356 aaPredicted RBP11.33□□□□□ -0.6
TPM1-212ENST00000558347 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 CGNQ9P2M7 1197 aaKnown RBP11.33□□□□□ -0.6
TPM1-212ENST00000558347 LRWD1Q9UFC0 647 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 PIN4Q9Y237 131 aaKnown RBP11.33□□□□□ -0.6
TPM1-212ENST00000558347 PCDHGC5Q9Y5F6 944 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
TPM1-212ENST00000558347 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
TPM1-212ENST00000558347 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
TPM1-212ENST00000558347 HOXA2O43364 376 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms