RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ARL13BQ3SXY8 428 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 TBC1D9BQ66K14 1250 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 DDIASQ8IXT1 998 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 STAMBPL1Q96FJ0 436 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 TMEM247A6NEH6 219 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 LRRC53A6NM62 1247 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 ATP1A1P05023 1023 aaKnown RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 RECQLP46063 649 aaPredicted RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 EN1Q05925 392 aaPredicted RBP14.8□□□□□ -0.04
SPG11-210ENST00000558319 HIC1Q14526 733 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 CEP78Q5JTW2 689 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 SFR1Q86XK3 245 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 NPHS2Q9NP85 383 aa14.8□□□□□ -0.04
SPG11-210ENST00000558319 H0Y626 953 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 CCDC188H7C350 402 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 ATP9BO43861 1147 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 TRIM16O95361 564 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 PDIA2Q13087 525 aaKnown RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 LAD1O00515 517 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 DEAF1O75398 565 aaPredicted RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 ASMTLO95671 621 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 SERPINB4P48594 390 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 GPS1Q13098 491 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 BZW1Q7L1Q6 419 aaKnown RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 TTLL6Q8N841 843 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 MMP19Q99542 508 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 C11orf70Q9BRQ4 267 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 CLDN3O15551 220 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 CHRNA5P30532 468 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 POTEGQ6S5H5 508 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 POTEEQ6S8J3 1075 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 CYB5R4Q7L1T6 521 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 C11orf96Q7Z7L8 435 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 EXOC8Q8IYI6 725 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 DHX38Q92620 1227 aaKnown RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 TMEM206Q9H813 350 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 CD248Q9HCU0 757 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 POTEB3A0JP26 581 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 POTECB2RU33 542 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 PRR23D1E9PI22 279 aaPredicted RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 PER1O15534 1290 aaPredicted RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 PRR23D2P0DMB1 279 aaPredicted RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 GPC3P51654 580 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 POTEBQ6S5H4 581 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 HPS3Q969F9 1004 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 DNAJC12Q9UKB3 198 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 WDR17Q8IZU2 1322 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 PHF20L1A8MW92 1017 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 KLC1Q07866 573 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 ARMCX2Q7L311 632 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 ANKMY2Q8IV38 441 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 NUP93Q8N1F7 819 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 MS4A14Q96JA4 679 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 TBC1D23Q9NUY8 699 aa14.79□□□□□ -0.04
SPG11-210ENST00000558319 SRPRBQ9Y5M8 271 aaKnown RBP14.79□□□□□ -0.04
SPG11-210ENST00000558319 TMA16Q96EY4 203 aaKnown RBP14.78□□□□□ -0.04
SPG11-210ENST00000558319 AK8Q96MA6 479 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 FAM118BQ9BPY3 351 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 WDR11Q9BZH6 1224 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 GOLPH3LQ9H4A5 285 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 ELP3Q9H9T3 547 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 HPCAL4Q9UM19 191 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 MEFVO15553 781 aaPredicted RBP14.78□□□□□ -0.04
SPG11-210ENST00000558319 MCAMP43121 646 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 KRT17Q04695 432 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 SPATA33Q96N06 139 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 AGAP3Q96P47 875 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 TAF1DQ9H5J8 278 aaPredicted RBP14.78□□□□□ -0.04
SPG11-210ENST00000558319 GABBR1Q9UBS5 961 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 CNOT8Q9UFF9 292 aaKnown RBP14.78□□□□□ -0.04
SPG11-210ENST00000558319 ARAP3Q8WWN8 1544 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 SERPINB10P48595 397 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 TBL3Q12788 808 aaKnown RBP14.78□□□□□ -0.04
SPG11-210ENST00000558319 UBE3CQ15386 1083 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 ZNF233A6NK53 670 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 KRT38O76015 456 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 GYS1P13807 737 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 PAMP19021 973 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 SPP2Q13103 211 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 C1orf54Q8WWF1 131 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 ZBTB10Q96DT7 871 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 PNMA6FA0A0J9YX94 578 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 TCN1P20061 433 aaPredicted RBP14.78□□□□□ -0.04
SPG11-210ENST00000558319 ZNF667Q5HYK9 610 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 ASZ1Q8WWH4 475 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 CYFIP2Q96F07 1278 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 ASIC4Q96FT7 647 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 SYNGAP1Q96PV0 1343 aa14.78□□□□□ -0.04
SPG11-210ENST00000558319 GRIK1P39086 918 aa14.77□□□□□ -0.04
SPG11-210ENST00000558319 VSNL1P62760 191 aa14.77□□□□□ -0.04
SPG11-210ENST00000558319 SPATA21Q7Z572 469 aa14.77□□□□□ -0.04
SPG11-210ENST00000558319 HEATR4Q86WZ0 1026 aa14.77□□□□□ -0.04
SPG11-210ENST00000558319 EPN3Q9H201 632 aa14.77□□□□□ -0.04
SPG11-210ENST00000558319 CSE1LP55060 971 aaKnown RBP14.77□□□□□ -0.04
SPG11-210ENST00000558319 RUBCNLQ9H714 662 aa14.77□□□□□ -0.04
SPG11-210ENST00000558319 SP110Q9HB58 689 aa14.77□□□□□ -0.04
SPG11-210ENST00000558319 MRPL40Q9NQ50 206 aaKnown RBP14.77□□□□□ -0.04
SPG11-210ENST00000558319 DDHD2O94830 711 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms