RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 LMNB2Q03252 620 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 RNF20Q5VTR2 975 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 MAML2Q8IZL2 1156 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-219ENST00000556432 BICD2Q8TD16 824 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 B3GALT6Q96L58 329 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 JPH2Q9BR39 696 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-219ENST00000556432 PRKD2Q9BZL6 878 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 RXFP1Q9HBX9 757 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 SMG5Q9UPR3 1016 aaKnown RBP15.61■□□□□ 0.09
ACTN1-219ENST00000556432 IGKV6-21A0A0C4DH24 114 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 KANSL1LA0AUZ9 987 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 TGM5O43548 720 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 MAFO75444 373 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-219ENST00000556432 SRGAP2CP0DJJ0 459 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 ITGA4P13612 1032 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 AKAP17AQ02040 695 aaKnown RBP15.6■□□□□ 0.09
ACTN1-219ENST00000556432 DSG1Q02413 1049 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 NECTIN1Q15223 517 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 ZNF528Q3MIS6 628 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 PLA2G4FQ68DD2 849 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 MRPL10Q7Z7H8 261 aaKnown RBP15.6■□□□□ 0.09
ACTN1-219ENST00000556432 RDM1Q8NG50 284 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 HDAC7Q8WUI4 952 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 SLC5A5Q92911 643 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 FAM217BQ9NTX9 383 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-219ENST00000556432 FBXO4Q9UKT5 387 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 PCDHGA2Q9Y5H1 932 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 COL4A3BPQ9Y5P4 624 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 MIA3Q5JRA6 1907 aa15.6■□□□□ 0.09
ACTN1-219ENST00000556432 MAP1BP46821 2468 aaKnown RBP15.59■□□□□ 0.09
ACTN1-219ENST00000556432 CCDC196A0A1B0GTZ2 297 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 DCDC2BA2VCK2 349 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 FAM170BA6NMN3 283 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 PRR5-ARHGAP8B1AHC4 643 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 F8W810 466 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 ERLIN2O94905 339 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 RPL17P18621 184 aaKnown RBP15.59■□□□□ 0.09
ACTN1-219ENST00000556432 ADD1P35611 737 aaKnown RBP15.59■□□□□ 0.09
ACTN1-219ENST00000556432 MLH1P40692 756 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 ARHGAP8P85298 464 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 MLF2Q15773 248 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-219ENST00000556432 ST3GAL2Q16842 350 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 PARM1Q6UWI2 310 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 COLGALT2Q8IYK4 626 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 SLC7A3Q8WY07 619 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 FGF14Q92915 247 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 CEP89Q96ST8 783 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 GAD1Q99259 594 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 ESYT1Q9BSJ8 1104 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 RPP25Q9BUL9 199 aaKnown RBP15.59■□□□□ 0.09
ACTN1-219ENST00000556432 APOL6Q9BWW8 343 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 IFT122Q9HBG6 1241 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 UBN1Q9NPG3 1134 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.59■□□□□ 0.09
ACTN1-219ENST00000556432 ZFP37Q9Y6Q3 630 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-219ENST00000556432 CHD8Q9HCK8 2581 aa15.59■□□□□ 0.09
ACTN1-219ENST00000556432 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.08
ACTN1-219ENST00000556432 SCNN1GP51170 649 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 UBXN11Q5T124 520 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 MTSS1LQ765P7 747 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 DHX32Q7L7V1 743 aaKnown RBP15.58■□□□□ 0.08
ACTN1-219ENST00000556432 SRGAP1Q7Z6B7 1085 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 GRASPQ7Z6J2 395 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-219ENST00000556432 CCDC148Q8NFR7 591 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 PSPC1Q8WXF1 523 aaKnown RBP15.58■□□□□ 0.08
ACTN1-219ENST00000556432 BORCS6Q96GS4 357 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 COLEC11Q9BWP8 271 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-219ENST00000556432 ZSCAN32Q9NX65 697 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 GMEB2Q9UKD1 530 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 CDH7Q9ULB5 785 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 POLIQ9UNA4 740 aa15.58■□□□□ 0.08
ACTN1-219ENST00000556432 MTF2Q9Y483 593 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-219ENST00000556432 PSMD10O75832 226 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 STBD1O95210 358 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 CD72P21854 359 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 HOXA11P31270 313 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-219ENST00000556432 USP11P51784 963 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 EXOSC10Q01780 885 aaKnown RBP15.57■□□□□ 0.08
ACTN1-219ENST00000556432 CREMQ03060 361 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 PRKCQQ04759 706 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 USP41Q3LFD5 358 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 SLC44A4Q53GD3 710 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 LIN9Q5TKA1 542 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 FUT10Q6P4F1 479 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 CNNM3Q8NE01 707 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 PRPF31Q8WWY3 499 aaKnown RBP15.57■□□□□ 0.08
ACTN1-219ENST00000556432 TMEM143Q96AN5 459 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 ZFP42Q96MM3 310 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 RTKNQ9BST9 563 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 MINDY3Q9H8M7 445 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 IPPQ9Y573 584 aa15.57■□□□□ 0.08
ACTN1-219ENST00000556432 ZMYND10O75800 440 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 RCAN1P53805 252 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 NPEPPSP55786 919 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 PSMC5P62195 406 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 NTHL1P78549 312 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 PFKPQ01813 784 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms