RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 PCDHGA12O60330 932 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 H2AFYO75367 372 aaKnown RBP5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 RPS6KA4O75676 772 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 HSP90AA1P07900 732 aaKnown RBP5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PF4V1P10720 104 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 RBP3P10745 1247 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 CCND1P24385 295 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 SPIRE1Q08AE8 756 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 LRRC32Q14392 662 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 ZNF174Q15697 407 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 CPZQ66K79 652 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PGM2L1Q6PCE3 622 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 CPA6Q8N4T0 437 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 VGLL2Q8N8G2 317 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 KBTBD3Q8NAB2 608 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 SCYL1Q96KG9 808 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 MTA3Q9BTC8 594 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 ARNT2Q9HBZ2 717 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 TCF7L1Q9HCS4 588 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 CCNL1Q9UK58 526 aaPredicted RBP5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PCDHGA9Q9Y5G4 932 aaKnown RBP5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PCDHGA8Q9Y5G5 932 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PCDHGA7Q9Y5G6 932 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PCDHGA6Q9Y5G7 932 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PCDHGA3Q9Y5H0 932 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 PCDHGA2Q9Y5H1 932 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 CCDC88AQ3V6T2 1871 aa5.53□□□□□ -1.52
PPP4R3A-204ENST00000554574 A0A0D9SFI3 127 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 KRT18P05783 430 aaKnown RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 KIF11P52732 1056 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PHC1P78364 1004 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 UBE4AQ14139 1066 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 SEC23AQ15436 765 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 CCDC152Q4G0S7 254 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 CCDC158Q5M9N0 1113 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 SLCO6A1Q86UG4 719 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 RASSF3Q86WH2 238 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 ZDHHC13Q8IUH4 622 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 MAP4K1Q92918 833 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 FAM227BQ96M60 508 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 CD244Q9BZW8 370 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PCIF1Q9H4Z3 704 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 ZMAT4Q9H898 229 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PAG1Q9NWQ8 432 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 NARFQ9UHQ1 456 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 SRPK3Q9UPE1 567 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 RGPD3A6NKT7 1758 aaPredicted RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 RGPD4Q7Z3J3 1758 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 MROH5Q6ZUA9 1318 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 LOC102724159A0A0B4J2E5 919 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 SCDO00767 359 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 DGKIO75912 1065 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PDE8BO95263 885 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 IFIT1P09914 478 aaKnown RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PTX3P26022 381 aaPredicted RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 RECQLP46063 649 aaPredicted RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PTH1RQ03431 593 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PDCD1Q15116 288 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 NECTIN1Q15223 517 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PWP2Q15269 919 aaKnown RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 ATP2B3Q16720 1220 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 GFOD2Q3B7J2 385 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 FIGNQ5HY92 759 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 METTL24Q5JXM2 366 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 CXorf57Q6NSI4 855 aaKnown RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 ESRP1Q6NXG1 681 aaKnown RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PNMA8AQ86V59 439 aaPredicted RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 LINC01599Q8WXQ3 324 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 EDC3Q96F86 508 aaKnown RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 HRASLS5Q96KN8 279 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 TM6SF1Q9BZW5 370 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 CNNM1Q9NRU3 951 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 MKS1Q9NXB0 559 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 PIM2Q9P1W9 311 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 COA3Q9Y2R0 106 aaPredicted RBP5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 SNX14Q9Y5W7 946 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 COL4A1P02462 1669 aa5.52□□□□□ -1.53
PPP4R3A-204ENST00000554574 GOLGA6CA6NDK9 693 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 GOLGA6BA6NDN3 693 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 PRR19A6NJB7 356 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 VSTM5A8MXK1 200 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 GOLIM4O00461 696 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 GSC2O15499 205 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 FRAT2O75474 233 aaPredicted RBP5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 USP2O75604 605 aaPredicted RBP5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 CFBP00751 764 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 GOLGA6DP0CG33 693 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 ZKSCAN1P17029 563 aaPredicted RBP5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 LSP1P33241 339 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 CD96P40200 585 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 GPR3P46089 330 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 PUM3Q15397 648 aaKnown RBP5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 AOC3Q16853 763 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 MCMDC2Q4G0Z9 681 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 GORABQ5T7V8 394 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 ZNF610Q8N9Z0 462 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 LMBR1Q8WVP7 490 aa5.51□□□□□ -1.53
PPP4R3A-204ENST00000554574 ASB11Q8WXH4 323 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms