RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 ITGA4P13612 1032 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 NCLP19338 710 aaKnown RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 ARL2P36404 184 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 TOB1P50616 345 aaPredicted RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 PCBP1Q15365 356 aaKnown RBP eCLIP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 AMHR2Q16671 573 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 FOXD4L6Q3SYB3 417 aaPredicted RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 FAM173BQ6P4H8 233 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 FOXD4L3Q6VB84 417 aaPredicted RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 DDX53Q86TM3 631 aaKnown RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 CATSPER3Q86XQ3 398 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 CASP10Q92851 521 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 FAM122AQ96E09 287 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 POLR3FQ9H1D9 316 aaPredicted RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 FOXP1Q9H334 677 aaPredicted RBP10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 TUFT1Q9NNX1 390 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 KIF3AQ9Y496 699 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 HES2Q9Y543 173 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 IPPQ9Y573 584 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 IRAK3Q9Y616 596 aa10.06□□□□□ -0.8
SDR39U1-207ENST00000553937 B4GALT5O43286 388 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 OR52Z1P0C646 297 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 CTSAP10619 480 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 HOXB8P17481 243 aaPredicted RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 ARF4P18085 180 aaPredicted RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 SP100P23497 879 aaPredicted RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.83e-21■■□□□ 12.6
SDR39U1-207ENST00000553937 AXLP30530 894 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 MLH1P40692 756 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 POU5F1BQ06416 359 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 ORC2Q13416 577 aaPredicted RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 PKP1Q13835 747 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 BMS1Q14692 1282 aaKnown RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 TTC38Q5R3I4 469 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 MAEAQ7L5Y9 396 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 CDR2LQ86X02 465 aaPredicted RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 CNNM3Q8NE01 707 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 EDAQ92838 391 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 CCDC51Q96ER9 411 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 INTS4Q96HW7 963 aaKnown RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 FAM193BQ96PV7 902 aaPredicted RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 TMEM175Q9BSA9 504 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 APOL6Q9BWW8 343 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 NFKBIZQ9BYH8 718 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 CSRNP2Q9H175 543 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 RNF39Q9H2S5 420 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 NXF3Q9H4D5 531 aaKnown RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 PCDHB6Q9Y5E3 794 aa10.05□□□□□ -0.8
SDR39U1-207ENST00000553937 DOCK8Q8NF50 2099 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 LRRIQ4A6NIV6 560 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 NRP1O14786 923 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 WEE2P0C1S8 567 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 XRCC6P12956 609 aaKnown RBP eCLIP10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 EPCAMP16422 314 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 SCNN1GP51170 649 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 GIT2Q14161 759 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 PTPN14Q15678 1187 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 HFE2Q6ZVN8 426 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 MCPH1Q8NEM0 835 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 ERMNQ8TAM6 284 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 NACC1Q96RE7 527 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 GAD1Q99259 594 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 TRIM6Q9C030 488 aaPredicted RBP10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 POMKQ9H5K3 350 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 UBN1Q9NPG3 1134 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 MARCH5Q9NX47 278 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 DBR1Q9UK59 544 aaKnown RBP10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 MTMR6Q9Y217 621 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 FAN1Q9Y2M0 1017 aa10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
SDR39U1-207ENST00000553937 INPPL1O15357 1258 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 STX6O43752 255 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 NPTXRO95502 500 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 ALDH2P05091 517 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 AKAP5P24588 427 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 RPA1P27694 616 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 OR1G1P47890 313 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 ZXDAP98168 799 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 CEBPZQ03701 1054 aaKnown RBP10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 ITIH3Q06033 890 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 DSC1Q08554 894 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 RESTQ13127 1097 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 RARS2Q5T160 578 aaKnown RBP10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 CES5AQ6NT32 575 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 KANK3Q6NY19 840 aa10.03□□□□□ -0.8
SDR39U1-207ENST00000553937 SLC27A1Q6PCB7 646 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms