RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 GHRP10912 638 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 CCNE1P24864 410 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 PRCPP42785 496 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 MATR3P43243 847 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 ZNF445P59923 1031 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 LPIN1Q14693 890 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 NOLC1Q14978 699 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 TPD52L1Q16890 204 aaPredicted RBP10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 PLEKHG4Q58EX7 1191 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 CENPPQ6IPU0 288 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 ARMCX5Q6P1M9 558 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 CNKSR3Q6P9H4 555 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 SLC27A1Q6PCB7 646 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 PSRC1Q6PGN9 363 aaPredicted RBP10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 LRSAM1Q6UWE0 723 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 MPZL3Q6UWV2 235 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 FAM228AQ86W67 206 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 SLC9A9Q8IVB4 645 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 FAM114A1Q8IWE2 563 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 C7orf61Q8IZ16 206 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 SCFD1Q8WVM8 642 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 P2RX5Q93086 422 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 WNT8BQ93098 351 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 ZBTB10Q96DT7 871 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 TSPAN18Q96SJ8 248 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 ACO2Q99798 780 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 BPIFA3Q9BQP9 254 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 TCHPQ9BT92 498 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 PPP1R12CQ9BZL4 782 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 ERVK-5Q9HDB9 667 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 UBN1Q9NPG3 1134 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 RWDD2AQ9UIY3 292 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 ST3GAL5Q9UNP4 418 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 PIN4Q9Y237 131 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 A0A1B0GUA9 196 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 ABHD14A-ACY1A0A1B0GW23 586 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 SYCE3A1L190 88 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 CARNS1A5YM72 827 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 CETN3O15182 167 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 MAPK13O15264 365 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 TSPAN1O60635 241 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 PRPF6O94906 941 aaKnown RBP10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 MCF2P10911 925 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 CYP2C18P33260 490 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 FKBP3Q00688 224 aaKnown RBP10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 FPGSQ05932 587 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 ENPEPQ07075 957 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 NFX1Q12986 1120 aaKnown RBP10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 IKBKEQ14164 716 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 SURF1Q15526 300 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 ZNF568Q3ZCX4 644 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 TWF2Q6IBS0 349 aaKnown RBP10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 ANKRD20A12PQ8NF67 263 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 POMGNT1Q8WZA1 660 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 PGBD4Q96DM1 585 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 CEP63Q96MT8 703 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 PPP1R16BQ96T49 567 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 KIFC3Q9BVG8 833 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 CCDC94Q9BW85 323 aaPredicted RBP10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 IL23AQ9NPF7 189 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 PADI3Q9ULW8 664 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 FRMD4BQ9Y2L6 1034 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 GDAQ9Y2T3 454 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 NOC2LQ9Y3T9 749 aaKnown RBP10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 STYXL1Q9Y6J8 313 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 CITO14578 2027 aa10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 MKI67P46013 3256 aaKnown RBP10.68□□□□□ -0.7
SMARCD1-206ENST00000549274 MICAL3Q7RTP6 2002 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 BECN2A8MW95 431 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 OGTO15294 1046 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 HOXA2O43364 376 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 EOMESO95936 686 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 TPM2P07951 284 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 STAG3L1P0CL83 205 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 ARF4P18085 180 aaPredicted RBP10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 CD52P31358 61 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 CASP5P51878 434 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 CCL23P55773 120 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 MCL1Q07820 350 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 AMHR2Q16671 573 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 ZC2HC1CQ53FD0 456 aaPredicted RBP10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 TRAF7Q6Q0C0 670 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 CD302Q8IX05 232 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 NELFCDQ8IXH7 590 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 TMEM40Q8WWA1 233 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 NELFBQ8WX92 580 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 ERCC4Q92889 916 aaPredicted RBP10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 MKNK1Q9BUB5 465 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 WNT8AQ9H1J5 351 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 KCTD10Q9H3F6 313 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 TSPY26PQ9H489 355 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 MINDY3Q9H8M7 445 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 CDHR5Q9HBB8 845 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 POLD4Q9HCU8 107 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 AGPAT3Q9NRZ7 376 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 TOPORSQ9NS56 1045 aaPredicted RBP10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 AGO2Q9UKV8 859 aaKnown RBP10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 LTBP2Q14767 1821 aa10.67□□□□□ -0.7
SMARCD1-206ENST00000549274 TRIM43BA6NCK2 446 aa10.66□□□□□ -0.7
SMARCD1-206ENST00000549274 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms