RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 PCSK1NQ9UHG2 260 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 NOX1Q9Y5S8 564 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 A6NJR5 290 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
CDH3-203ENST00000542274 TOP1P11387 765 aaKnown RBP11.91□□□□□ -0.5
CDH3-203ENST00000542274 PRKACBP22694 351 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 CALML3P27482 149 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 PRELPP51888 382 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 RIPK1Q13546 671 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 E2F2Q14209 437 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 KCTD1Q719H9 257 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 IFT43Q96FT9 208 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 WDR24Q96S15 920 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 UQCC2Q9BRT2 126 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 SEC63Q9UGP8 760 aaKnown RBP11.91□□□□□ -0.5
CDH3-203ENST00000542274 FAM32AQ9Y421 112 aaKnown RBP11.91□□□□□ -0.5
CDH3-203ENST00000542274 MYH4Q9Y623 1939 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 TEX33O43247 280 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 B4GALT4O60513 344 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 ETV3P41162 512 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 STIM1Q13586 685 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 PPP1R7Q15435 360 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 NAALADL2Q58DX5 795 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 ZNF746Q6NUN9 644 aaPredicted RBP11.9□□□□□ -0.5
CDH3-203ENST00000542274 GJA10Q969M2 543 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 CCDC42Q96M95 316 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 PSKH2Q96QS6 385 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 ERP44Q9BS26 406 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 ZNF287Q9HBT7 754 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 RASAL2Q9UJF2 1139 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 GDAQ9Y2T3 454 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 A6NNZ2 444 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.5
CDH3-203ENST00000542274 HLA-DOAP06340 250 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 PCNAP12004 261 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 ZNF18P17022 549 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 TAL1P17542 331 aaPredicted RBP11.9□□□□□ -0.5
CDH3-203ENST00000542274 SFPQP23246 707 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH3-203ENST00000542274 GNG11P61952 73 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 TBL3Q12788 808 aaKnown RBP11.9□□□□□ -0.5
CDH3-203ENST00000542274 TUBB8Q3ZCM7 444 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 CDAN1Q8IWY9 1227 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 MLKLQ8NB16 471 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 RETREG2Q8NC44 543 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 NOA1Q8NC60 698 aaKnown RBP11.9□□□□□ -0.5
CDH3-203ENST00000542274 ZNF75CPQ92670 426 aaPredicted RBP11.9□□□□□ -0.5
CDH3-203ENST00000542274 SKA1Q96BD8 255 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 EEF2KMTQ96G04 330 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 HIC2Q96JB3 615 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 GMLQ99445 158 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 DISC1Q9NRI5 854 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH3-203ENST00000542274 DLGAP2Q9P1A6 1054 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 CCPG1Q9ULG6 757 aa11.9□□□□□ -0.5
CDH3-203ENST00000542274 PPP1R3GB7ZBB8 358 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 BIRC5O15392 142 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 SNX2O60749 519 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 CLASP2O75122 1294 aaKnown RBP11.89□□□□□ -0.51
CDH3-203ENST00000542274 APOEP02649 317 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 BTF3P20290 206 aaKnown RBP11.89□□□□□ -0.51
CDH3-203ENST00000542274 CETN2P41208 172 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 ADKP55263 362 aaKnown RBP11.89□□□□□ -0.51
CDH3-203ENST00000542274 KCTD2Q14681 263 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 GLMNQ92990 594 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 PRPF18Q99633 342 aaKnown RBP11.89□□□□□ -0.51
CDH3-203ENST00000542274 SPZ1Q9BXG8 430 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 BHMT2Q9H2M3 363 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 HSFX1Q9UBD0 423 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 CTNND2Q9UQB3 1225 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 SQORQ9Y6N5 450 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 USH1CQ9Y6N9 552 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 PPP1R11O60927 126 aaPredicted RBP11.89□□□□□ -0.51
CDH3-203ENST00000542274 ZBED4O75132 1171 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 ATP2C2O75185 946 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 DGKIO75912 1065 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 GDF11O95390 407 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 SPATA31D3P0C874 917 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 ANXA13P27216 316 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 TKTP29401 623 aaKnown RBP11.89□□□□□ -0.51
CDH3-203ENST00000542274 TRAPPC10P48553 1259 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 MCL1Q07820 350 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 UBE2SQ16763 222 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 SPATA31D4Q6ZUB0 917 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 VSTM4Q8IW00 320 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 MAP7D3Q8IWC1 876 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 BRSK1Q8TDC3 778 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 TBCKQ8TEA7 893 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
CDH3-203ENST00000542274 CDHR1Q96JP9 859 aa11.89□□□□□ -0.51
CDH3-203ENST00000542274 ZMYND12Q9H0C1 365 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms