RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 VSIG10L2P0DP72 767 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 ADSLP30566 484 aaPredicted RBP7.74□□□□□ -1.17
CASP4-208ENST00000530309 BPIFB4P59827 614 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 SEPT2Q15019 361 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 RNF151Q2KHN1 245 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 MST1LQ2TV78 715 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 C3orf36Q3SXR2 165 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 GAGE13Q4V321 117 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 MIGA2Q7L4E1 593 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 C1QL4Q86Z23 238 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 PRR18Q8N4B5 295 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 OR2I1PQ8NGU4 316 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.74□□□□□ -1.17
CASP4-208ENST00000530309 HOXB13Q92826 284 aaPredicted RBP7.74□□□□□ -1.17
CASP4-208ENST00000530309 HPS3Q969F9 1004 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 C7orf25Q9BPX7 421 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 TLR9Q9NR96 1032 aa7.74□□□□□ -1.17
CASP4-208ENST00000530309 ECHS1P30084 290 aa7.73□□□□□ -1.17
CASP4-208ENST00000530309 B3GNT9Q6UX72 402 aa7.73□□□□□ -1.17
CASP4-208ENST00000530309 Q6ZVL8 140 aa7.73□□□□□ -1.17
CASP4-208ENST00000530309 ANKRD53Q8N9V6 530 aa7.73□□□□□ -1.17
CASP4-208ENST00000530309 SLC35G2Q8TBE7 412 aa7.73□□□□□ -1.17
CASP4-208ENST00000530309 ZNF480Q8WV37 535 aa7.73□□□□□ -1.17
CASP4-208ENST00000530309 MAP3K14Q99558 947 aa7.73□□□□□ -1.17
CASP4-208ENST00000530309 ERC2O15083 957 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 TRIM13O60858 407 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 ENDOD1O94919 500 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 GASTP01350 101 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 ZNF267Q14586 743 aaPredicted RBP7.72□□□□□ -1.17
CASP4-208ENST00000530309 ACAP1Q15027 740 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 KRT40Q6A162 431 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 PLEKHH3Q7Z736 793 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 ZDHHC14Q8IZN3 488 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 LGI4Q8N135 537 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 CFHR4Q92496 578 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 MVB12AQ96EY5 273 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 USP40Q9NVE5 1235 aa7.72□□□□□ -1.17
CASP4-208ENST00000530309 PUF60Q9UHX1 559 aaKnown RBP7.72□□□□□ -1.17
CASP4-208ENST00000530309 PMS2P1A4D2B8 440 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 VSTM5A8MXK1 200 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 RAC3P60763 192 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 ADAM8P78325 824 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 DUSP2Q05923 314 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 IL10RAQ13651 578 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 MARCH10Q8NA82 808 aaPredicted RBP7.71□□□□□ -1.18
CASP4-208ENST00000530309 SYT8Q8NBV8 401 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 OR7D4Q8NG98 312 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 RABGGTAQ92696 567 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 RPL10LQ96L21 214 aaKnown RBP7.71□□□□□ -1.18
CASP4-208ENST00000530309 TAAR9Q96RI9 348 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 KRTAP9-2Q9BYQ4 174 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 BCO1Q9HAY6 547 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 GPRC5DQ9NZD1 345 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 RCAN3Q9UKA8 241 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 PCDHA13Q9Y5I0 950 aa7.71□□□□□ -1.18
CASP4-208ENST00000530309 CFAP20Q9Y6A4 193 aaKnown RBP7.71□□□□□ -1.18
CASP4-208ENST00000530309 NRP1O14786 923 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 SLC26A4O43511 780 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 CNOT4O95628 575 aaKnown RBP7.7□□□□□ -1.18
CASP4-208ENST00000530309 GYPEP15421 78 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 CRHR1P34998 444 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 FXR1P51114 621 aaKnown RBP eCLIP7.7□□□□□ -1.18
CASP4-208ENST00000530309 PER3P56645 1201 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 PGS1Q32NB8 556 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 ARHGAP29Q52LW3 1261 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 PPP4R3AQ6IN85 833 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 RHOT1Q8IXI2 618 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 GRAMD1CQ8IYS0 662 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 LILRA3Q8N6C8 439 aaPredicted RBP7.7□□□□□ -1.18
CASP4-208ENST00000530309 DIS3LQ8TF46 1054 aaKnown RBP7.7□□□□□ -1.18
CASP4-208ENST00000530309 RUNDC1Q96C34 613 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 C1GALT1C1Q96EU7 318 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 GPHA2Q96T91 129 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 OBP2AQ9NY56 170 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 TRPS1Q9UHF7 1281 aa7.7□□□□□ -1.18
CASP4-208ENST00000530309 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
CASP4-208ENST00000530309 MATN2O00339 956 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 PRC1O43663 620 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 ITGA10O75578 1167 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 RPLP2P05387 115 aaKnown RBP7.69□□□□□ -1.18
CASP4-208ENST00000530309 SREBF1P36956 1147 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 SLC6A9P48067 706 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 PPP2CBP62714 309 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 PPP2CAP67775 309 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 SURF1Q15526 300 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 ARHGEF18Q6ZSZ5 1173 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 CMTM4Q8IZR5 234 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 PQLC1Q8N2U9 271 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 KAT5Q92993 513 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 CYFIP2Q96F07 1278 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 UHRF1Q96T88 793 aaPredicted RBP7.69□□□□□ -1.18
CASP4-208ENST00000530309 MANSC1Q9H8J5 431 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 SEC61A2Q9H9S3 476 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.69□□□□□ -1.18
CASP4-208ENST00000530309 SIK3Q9Y2K2 1263 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 PCDHB1Q9Y5F3 818 aa7.69□□□□□ -1.18
CASP4-208ENST00000530309 SGTAO43765 313 aa7.68□□□□□ -1.18
CASP4-208ENST00000530309 CTNND1O60716 968 aaKnown RBP7.68□□□□□ -1.18
CASP4-208ENST00000530309 SASH1O94885 1247 aa7.68□□□□□ -1.18
CASP4-208ENST00000530309 ZSCAN22P10073 491 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms