RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	RNF180	Q86T96	592 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	CATSPER3	Q86XQ3	398 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	TREML1	Q86YW5	311 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	TPH2	Q8IWU9	490 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	ETFBKMT	Q8IXQ9	262 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	CEP57L1	Q8IYX8	460 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	IQUB	Q8NA54	791 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	KLHDC9	Q8NEP7	349 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	SCFD2	Q8WU76	684 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	HSH2D	Q96JZ2	352 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	LXN	Q9BS40	222 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	CCDC94	Q9BW85	323 aa	Predicted RBP	6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	ZNF576	Q9H609	170 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	GRPEL1	Q9HAV7	217 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	JPH1	Q9HDC5	661 aa	Predicted RBP	6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	VTA1	Q9NP79	307 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	BLOC1S4	Q9NUP1	217 aa		6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	WRAP73	Q9P2S5	460 aa	Predicted RBP	6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	DDX41	Q9UJV9	622 aa	Known RBP	6.01	□□□□□ -1.45
CDH17-205	ENST00000521491	SYNRG	Q9UMZ2	1314 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	PRUNE2	Q8WUY3	3088 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TMEM265	A0A087WTH1	108 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TMEM150B	A6NC51	233 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	ZBTB39	O15060	712 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	NDUFB5	O43674	189 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	MICAL2	O94851	1124 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	SLITRK3	O94933	977 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TIMP1	P01033	207 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	SSB	P05455	408 aa	Known RBP eCLIP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	P4HB	P07237	508 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	SLFN14	P0C7P3	912 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	SPATA31C1	P0DKV0	1188 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	ACR	P10323	421 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	AKR1A1	P14550	325 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	CSF2RA	P15509	400 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	MSN	P26038	577 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	RPA1	P27694	616 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	SFN	P31947	248 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	CDK7	P50613	346 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	JAK3	P52333	1124 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	MARS	P56192	900 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	ACTR2	P61160	394 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	PSMC6	P62333	389 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	FAM193A	P78312	1265 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	ARHGAP1	Q07960	439 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	CUL4B	Q13620	913 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	ADGRE1	Q14246	886 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	NEDD9	Q14511	834 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TTLL4	Q14679	1199 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	POSTN	Q15063	836 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	CCDC85B	Q15834	202 aa	Predicted RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	KCNA10	Q16322	511 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	CCDC144B	Q3MJ40	725 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TMEM240	Q5SV17	173 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	CELF3	Q5SZQ8	465 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	HYI	Q5T013	277 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	ZNF746	Q6NUN9	644 aa	Predicted RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	CCDC62	Q6P9F0	684 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	KCNV1	Q6PIU1	500 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	RBM43	Q6ZSC3	357 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	ANKRD33	Q7Z3H0	272 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	BTLA	Q7Z6A9	289 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	CCDC60	Q8IWA6	550 aa	Predicted RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	DHX37	Q8IY37	1157 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	MSL3	Q8N5Y2	521 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	NEK9	Q8TD19	979 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	PIGO	Q8TEQ8	1089 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	LARP4B	Q92615	738 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	RAD54L	Q92698	747 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TIFA	Q96CG3	184 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	PAGE5	Q96GU1	130 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TIGD1	Q96MW7	591 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	PPP1R9B	Q96SB3	815 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	SENP7	Q9BQF6	1050 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	PYM1	Q9BRP8	204 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	POLR3C	Q9BUI4	534 aa	Predicted RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	PBX4	Q9BYU1	374 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	NT5C3A	Q9H0P0	336 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TSPYL1	Q9H0U9	437 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	NUCKS1	Q9H1E3	243 aa	Known RBP	6	□□□□□ -1.45
CDH17-205	ENST00000521491	BLZF1	Q9H2G9	400 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	ABHD16B	Q9H3Z7	469 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	PRDM12	Q9H4Q4	367 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	MLXIP	Q9HAP2	919 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	STARD7	Q9NQZ5	370 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	GABBR1	Q9UBS5	961 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	STK17A	Q9UEE5	414 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	USP25	Q9UHP3	1055 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	NRBP1	Q9UHY1	535 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	DCTN4	Q9UJW0	460 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	TBX21	Q9UL17	535 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	GBF1	Q92538	1859 aa		6	□□□□□ -1.45
CDH17-205	ENST00000521491	IGSF9B	Q9UPX0	1349 aa		5.99	□□□□□ -1.45
CDH17-205	ENST00000521491	SI	P14410	1827 aa		5.99	□□□□□ -1.45
CDH17-205	ENST00000521491	NPHP3-ACAD11	A0A0J9YXS1	232 aa		5.99	□□□□□ -1.45
CDH17-205	ENST00000521491	GSTTP1	A0A1W2PQM5	241 aa		5.99	□□□□□ -1.45
CDH17-205	ENST00000521491	RBM47	A0AV96	593 aa	Known RBP	5.99	□□□□□ -1.45
CDH17-205	ENST00000521491	DCDC2C	A8MYV0	355 aa		5.99	□□□□□ -1.45
CDH17-205	ENST00000521491	BIN1	O00499	593 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms