RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 VSIG10LQ86VR7 867 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.94□□□□□ -1.14
RFC1-215ENST00000512881 MB21D2Q8IYB1 491 aaPredicted RBP7.94□□□□□ -1.14
RFC1-215ENST00000512881 SAMD3Q8N6K7 520 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 MAFAQ8NHW3 353 aaPredicted RBP7.94□□□□□ -1.14
RFC1-215ENST00000512881 KAT2BQ92831 832 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 PDCD2LQ9BRP1 358 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 MTIF3Q9H2K0 278 aaKnown RBP7.94□□□□□ -1.14
RFC1-215ENST00000512881 CCDC86Q9H6F5 360 aaKnown RBP7.94□□□□□ -1.14
RFC1-215ENST00000512881 RAD18Q9NS91 495 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 MSRAQ9UJ68 235 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 RBM8AQ9Y5S9 174 aaKnown RBP7.94□□□□□ -1.14
RFC1-215ENST00000512881 MRVI1Q9Y6F6 885 aa7.94□□□□□ -1.14
RFC1-215ENST00000512881 CHD7Q9P2D1 2997 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 FAM170BA6NMN3 283 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 TMPRSS2O15393 492 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 MMP3P08254 477 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 RAB30Q15771 203 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 ENOX2Q16206 610 aaKnown RBP7.93□□□□□ -1.14
RFC1-215ENST00000512881 DGKDQ16760 1214 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 SEZ6L2Q6UXD5 910 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 DTHD1Q6ZMT9 781 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 DEFB128Q7Z7B8 93 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 DHX37Q8IY37 1157 aaKnown RBP7.93□□□□□ -1.14
RFC1-215ENST00000512881 PIBF1Q8WXW3 757 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 WDR89Q96FK6 387 aaPredicted RBP7.93□□□□□ -1.14
RFC1-215ENST00000512881 BCO2Q9BYV7 579 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 LSG1Q9H089 658 aaKnown RBP7.93□□□□□ -1.14
RFC1-215ENST00000512881 PCDHGC5Q9Y5F6 944 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 SLC4A7Q9Y6M7 1214 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 LTBP2Q14767 1821 aa7.93□□□□□ -1.14
RFC1-215ENST00000512881 SPTBN5Q9NRC6 3674 aaKnown RBP7.92□□□□□ -1.14
RFC1-215ENST00000512881 PRC1O43663 620 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 ZNF862O60290 1169 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 SORBS3O60504 671 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 PPFIA4O75335 1185 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 PFKMP08237 780 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 IQCF3P0C7M6 154 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 TGFB3P10600 412 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 CCND2P30279 289 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 KIF5BP33176 963 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 MCM5P33992 734 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 RFC2P35250 354 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 RABGGTBP53611 331 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 SP2Q02086 613 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 BFSP2Q13515 415 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 MAP7Q14244 749 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 PGM5Q15124 567 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 PTGISQ16647 500 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 CELF3Q5SZQ8 465 aaKnown RBP7.92□□□□□ -1.14
RFC1-215ENST00000512881 KCNV1Q6PIU1 500 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 CASC1Q6TDU7 716 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 PDZD3Q86UT5 571 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 SESTD1Q86VW0 696 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 ZNF654Q8IZM8 581 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 TMTC2Q8N394 836 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 C7orf31Q8N865 590 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 IL31RAQ8NI17 732 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 PPTC7Q8NI37 304 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 MAP3K14Q99558 947 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 MTA3Q9BTC8 594 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 FTOQ9C0B1 505 aaKnown RBP eCLIP7.92□□□□□ -1.14
RFC1-215ENST00000512881 NKX2-4Q9H2Z4 354 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 LY9Q9HBG7 655 aa7.92□□□□□ -1.14
RFC1-215ENST00000512881 YBX2Q9Y2T7 364 aaKnown RBP7.92□□□□□ -1.14
RFC1-215ENST00000512881 MCM3APO60318 1980 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 SH2B2O14492 632 aaPredicted RBP7.91□□□□□ -1.14
RFC1-215ENST00000512881 SLC27A2O14975 620 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 DDAH1O94760 285 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 GGPS1O95749 300 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 GSTP1P09211 210 aaKnown RBP7.91□□□□□ -1.14
RFC1-215ENST00000512881 ACTN1P12814 892 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 MYOGP15173 224 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
RFC1-215ENST00000512881 LIG1P18858 919 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 SMARCA1P28370 1054 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 LIFRP42702 1097 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 ASPAP45381 313 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 GNAQP50148 359 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 NECTIN1Q15223 517 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 KIAA0753Q2KHM9 967 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 CREB3L3Q68CJ9 461 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 NFXL1Q6ZNB6 911 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 CTCFLQ8NI51 663 aaPredicted RBP7.91□□□□□ -1.14
RFC1-215ENST00000512881 RRP36Q96EU6 259 aaKnown RBP7.91□□□□□ -1.14
RFC1-215ENST00000512881 SPATA33Q96N06 139 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 CTAGE1Q96RT6 745 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 LZTS2Q9BRK4 669 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 ALG1Q9BT22 464 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 MYL10Q9BUA6 226 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 SPZ1Q9BXG8 430 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 PRDM12Q9H4Q4 367 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 SLC28A3Q9HAS3 691 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 C1GALT1Q9NS00 363 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 HDAC6Q9UBN7 1215 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 GPN3Q9UHW5 284 aaPredicted RBP7.91□□□□□ -1.14
RFC1-215ENST00000512881 PCDHA11Q9Y5I1 949 aa7.91□□□□□ -1.14
RFC1-215ENST00000512881 CCDC69A6NI79 296 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms