RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 NT5DC1Q5TFE4 455 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 TAS1R3Q7RTX0 852 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 ECHDC2Q86YB7 292 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 ACCSQ96QU6 501 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 ACO2Q99798 780 aaKnown RBP18.77■□□□□ 0.6
HDAC6-235ENST00000495515 TCHPQ9BT92 498 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 TMEM206Q9H813 350 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 TNFSF13BQ9Y275 285 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 PCDHB2Q9Y5E7 798 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 HNRNPDLO14979 420 aaKnown RBP18.76■□□□□ 0.59
HDAC6-235ENST00000495515 KLRC4O43908 158 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 TOM1L1O75674 476 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 GJB5O95377 273 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 PRR29P0C7W0 189 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 LIG4P49917 911 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 EHHADHQ08426 723 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 PNOCQ13519 176 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 KCNB1Q14721 858 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 DCAF4L1Q3SXM0 396 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 KMT5BQ4FZB7 885 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 ZC2HC1CQ53FD0 456 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-235ENST00000495515 MAP4K3Q8IVH8 894 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 SMARCE1Q969G3 411 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 TARS2Q9BW92 718 aaKnown RBP18.76■□□□□ 0.59
HDAC6-235ENST00000495515 GTPBP4Q9BZE4 634 aaKnown RBP18.76■□□□□ 0.59
HDAC6-235ENST00000495515 PDZD7Q9H5P4 517 aa18.76■□□□□ 0.59
HDAC6-235ENST00000495515 EIF3DO15371 548 aaKnown RBP eCLIP18.75■□□□□ 0.59
HDAC6-235ENST00000495515 TLL1O43897 1013 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 PPP1R37O75864 691 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 KIF20AO95235 890 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 MBD3O95983 291 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 PIGRP01833 764 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 RAB30Q15771 203 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 UBXN11Q5T124 520 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 L1TD1Q5T7N2 865 aaKnown RBP18.75■□□□□ 0.59
HDAC6-235ENST00000495515 FAM117BQ6P1L5 589 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 SYCP3Q8IZU3 236 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 RNF169Q8NCN4 708 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 RSPH1Q8WYR4 309 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 GSDMAQ96QA5 445 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 YME1L1Q96TA2 773 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 RAD9AQ99638 391 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 STRA6Q9BX79 667 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 UBN1Q9NPG3 1134 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 MSRAQ9UJ68 235 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 INSL6Q9Y581 213 aa18.75■□□□□ 0.59
HDAC6-235ENST00000495515 UBE4BO95155 1302 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 CLDN3O15551 220 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 RHOBTB3O94955 611 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 NPTXRO95502 500 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 MYBP10242 640 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 PTMSP20962 102 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 MATR3P43243 847 aaKnown RBP eCLIP18.74■□□□□ 0.59
HDAC6-235ENST00000495515 SMAD3P84022 425 aaKnown RBP18.74■□□□□ 0.59
HDAC6-235ENST00000495515 ZNF568Q3ZCX4 644 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 SLFN12LQ6IEE8 588 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 MPZL3Q6UWV2 235 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 MRPL10Q7Z7H8 261 aaKnown RBP18.74■□□□□ 0.59
HDAC6-235ENST00000495515 CDR2LQ86X02 465 aaPredicted RBP18.74■□□□□ 0.59
HDAC6-235ENST00000495515 ABI1Q8IZP0 508 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 HPS3Q969F9 1004 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 EIF2AQ9BY44 585 aaKnown RBP18.74■□□□□ 0.59
HDAC6-235ENST00000495515 SLC39A2Q9NP94 309 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 USP20Q9Y2K6 914 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 PCDHA11Q9Y5I1 949 aa18.74■□□□□ 0.59
HDAC6-235ENST00000495515 TTLL13PA6NNM8 815 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 RBAK-RBAKDNI3L0D1 243 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 EDN1P05305 212 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 MCF2P10911 925 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 ITGA4P13612 1032 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 MCM4P33991 863 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 CASP5P51878 434 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 EEF1DP3Q658K8 133 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 ZNF598Q86UK7 904 aaKnown RBP18.73■□□□□ 0.59
HDAC6-235ENST00000495515 CRIPAKQ8N1N5 446 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 ZNF507Q8TCN5 953 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 PTPRHQ9HD43 1115 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 ANKFY1Q9P2R3 1169 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 IPPQ9Y573 584 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 PCDHA5Q9Y5H7 936 aa18.73■□□□□ 0.59
HDAC6-235ENST00000495515 GRXCR1A8MXD5 290 aa18.72■□□□□ 0.59
HDAC6-235ENST00000495515 DGKIO75912 1065 aa18.72■□□□□ 0.59
HDAC6-235ENST00000495515 PRPF6O94906 941 aaKnown RBP18.72■□□□□ 0.59
HDAC6-235ENST00000495515 PROZP22891 400 aa18.72■□□□□ 0.59
HDAC6-235ENST00000495515 HTRA4P83105 476 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-235ENST00000495515 NOLC1Q14978 699 aaKnown RBP eCLIP18.72■□□□□ 0.59
HDAC6-235ENST00000495515 KYAT1Q16773 422 aa18.72■□□□□ 0.59
HDAC6-235ENST00000495515 GLB1LQ6UWU2 654 aa18.72■□□□□ 0.59
HDAC6-235ENST00000495515 EPM2AIP1Q7L775 607 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-235ENST00000495515 TMCO2Q7Z6W1 182 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-235ENST00000495515 MYH11P35749 1972 aa18.72■□□□□ 0.59
HDAC6-235ENST00000495515 MICAL3Q7RTP6 2002 aa18.71■□□□□ 0.59
HDAC6-235ENST00000495515 ATF7P17544 494 aaPredicted RBP18.71■□□□□ 0.59
HDAC6-235ENST00000495515 RABGGTBP53611 331 aa18.71■□□□□ 0.59
HDAC6-235ENST00000495515 MCL1Q07820 350 aa18.71■□□□□ 0.59
HDAC6-235ENST00000495515 STK4Q13043 487 aa18.71■□□□□ 0.59
HDAC6-235ENST00000495515 BMT2Q1RMZ1 405 aa18.71■□□□□ 0.59
HDAC6-235ENST00000495515 FAM109BQ6ICB4 259 aaPredicted RBP18.71■□□□□ 0.59
HDAC6-235ENST00000495515 ZBTB33Q86T24 672 aa18.71■□□□□ 0.59
HDAC6-235ENST00000495515 SMG8Q8ND04 991 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms