RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ORAI3Q9BRQ5 295 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 EPC1Q9H2F5 836 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 PODXL2Q9NZ53 605 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 FZD1Q9UP38 647 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 SORCS3Q9UPU3 1222 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 HECW1Q76N89 1606 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 UHRF1BP1LA0JNW5 1464 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 ADGRL1O94910 1474 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 WDR7Q9Y4E6 1490 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 BCORL1Q5H9F3 1711 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 PREX2Q70Z35 1606 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 GRXCR1A8MXD5 290 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 GAS7O60861 476 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 STC2O76061 302 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 ALDH1A2O94788 518 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 PCDH8O95206 1070 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 ASMTLO95671 621 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 HK1P19367 917 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 BMP5P22003 454 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 LRRC32Q14392 662 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 PTPAQ15257 358 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 MBNL2Q5VZF2 373 aaKnown RBP4.66□□□□□ -1.66
PTCD3-218ENST00000493430 RHOUQ7L0Q8 258 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 SYNPOQ8N3V7 929 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 PPP1R14CQ8TAE6 165 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 CPT1CQ8TCG5 803 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 PROKR1Q8TCW9 393 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 FAM193BQ96PV7 902 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-218ENST00000493430 CPPED1Q9BRF8 314 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-218ENST00000493430 ZMAT4Q9H898 229 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 KANSL2Q9H9L4 492 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 ING3Q9NXR8 418 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 MYPNQ86TC9 1320 aa4.66□□□□□ -1.66
PTCD3-218ENST00000493430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCD3-218ENST00000493430 HECW2Q9P2P5 1572 aa4.65□□□□□ -1.66
PTCD3-218ENST00000493430 ATP10BO94823 1461 aa4.65□□□□□ -1.66
PTCD3-218ENST00000493430 ARHGAP35Q9NRY4 1499 aa4.65□□□□□ -1.66
PTCD3-218ENST00000493430 ABHD16AO95870 558 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 F2P00734 622 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 ITGB1P05556 798 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 TGM1P22735 817 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 NEK4P51957 841 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 COL10A1Q03692 680 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 CD69Q07108 199 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 FAM214AQ32MH5 1076 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 METTL24Q5JXM2 366 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 ESPNLQ6ZVH7 1005 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 FAM83AQ86UY5 434 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 VRK3Q8IV63 474 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 UNC5BQ8IZJ1 945 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 EFHBQ8N7U6 833 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 OR5M3Q8NGP4 307 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 PDCD2LQ9BRP1 358 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 ENKD1Q9H0I2 346 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 ZSWIM4Q9H7M6 989 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 TMEM260Q9NX78 707 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 H2AFY2Q9P0M6 372 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-218ENST00000493430 USP36Q9P275 1121 aaKnown RBP4.65□□□□□ -1.67
PTCD3-218ENST00000493430 PCDHB6Q9Y5E3 794 aa4.65□□□□□ -1.67
PTCD3-218ENST00000493430 ABCA6Q8N139 1617 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 ADAMTSL3P82987 1691 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 ADGBQ8N7X0 1667 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 EFCAB5A4FU69 1503 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 ST20-MTHFSA0A0A6YYL1 179 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 ELL2O00472 640 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-218ENST00000493430 TRIM24O15164 1050 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 SCAF4O95104 1147 aaKnown RBP4.64□□□□□ -1.67
PTCD3-218ENST00000493430 GYPEP15421 78 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 NR4A1P22736 598 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 TIGD2Q4W5G0 525 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 DPY19L2P1Q6NXN4 242 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 KCNV1Q6PIU1 500 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 LRRC55Q6ZSA7 311 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 CDYL2Q8N8U2 506 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 GLB1L3Q8NCI6 653 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-218ENST00000493430 SREK1Q8WXA9 508 aaKnown RBP4.64□□□□□ -1.67
PTCD3-218ENST00000493430 FERMT2Q96AC1 680 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 MLST8Q9BVC4 326 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 PACSIN3Q9UKS6 424 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 HDAC5Q9UQL6 1122 aa4.64□□□□□ -1.67
PTCD3-218ENST00000493430 GOLGA3Q08378 1498 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 ARHGEF40Q8TER5 1519 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 KPNA6O60684 536 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 DNAJC6O75061 913 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 LY86O95711 162 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 LAG3P18627 525 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 XPAP23025 273 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-218ENST00000493430 CASRP41180 1078 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 WNT3AP56704 352 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 MRPL49Q13405 166 aaKnown RBP4.63□□□□□ -1.67
PTCD3-218ENST00000493430 TCEA2Q15560 299 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 PLEKHG4Q58EX7 1191 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 IQSEC1Q6DN90 963 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 NXPE1Q8N323 547 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 PIK3C3Q8NEB9 887 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 CHTF18Q8WVB6 975 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 IL17RAQ96F46 866 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 ZNF496Q96IT1 587 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-218ENST00000493430 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
PTCD3-218ENST00000493430 KCNH6Q9H252 994 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms