RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 RAB30Q15771 203 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 DCAF4L1Q3SXM0 396 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 NT5DC1Q5TFE4 455 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 ECHDC2Q86YB7 292 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 MAP4K3Q8IVH8 894 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 BICD1Q96G01 975 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 RAD9AQ99638 391 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 ACO2Q99798 780 aaKnown RBP17.52■□□□□ 0.4
HDAC7-224ENST00000488927 STRA6Q9BX79 667 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 GTPBP4Q9BZE4 634 aaKnown RBP17.52■□□□□ 0.4
HDAC7-224ENST00000488927 PDZD7Q9H5P4 517 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 TMEM206Q9H813 350 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 RMND1Q9NWS8 449 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 TBC1D7Q9P0N9 293 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 INSL6Q9Y581 213 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 PCDHB2Q9Y5E7 798 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 PCDHA11Q9Y5I1 949 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 MYH11P35749 1972 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 UBE4BO95155 1302 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 HNRNPDLO14979 420 aaKnown RBP17.51■□□□□ 0.39
HDAC7-224ENST00000488927 EIF3DO15371 548 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDAC7-224ENST00000488927 TLL1O43897 1013 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 KLRC4O43908 158 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 TOM1L1O75674 476 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 PPP1R37O75864 691 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 UPP2O95045 317 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 LIG4P49917 911 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 KCNB1Q14721 858 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 KMT5BQ4FZB7 885 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 UBXN11Q5T124 520 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 L1TD1Q5T7N2 865 aaKnown RBP17.51■□□□□ 0.39
HDAC7-224ENST00000488927 CRIPAKQ8N1N5 446 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 ACCSQ96QU6 501 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 YME1L1Q96TA2 773 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 UBN1Q9NPG3 1134 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 MSRAQ9UJ68 235 aa17.51■□□□□ 0.39
HDAC7-224ENST00000488927 RHOBTB3O94955 611 aa17.5■□□□□ 0.39
HDAC7-224ENST00000488927 KIF20AO95235 890 aa17.5■□□□□ 0.39
HDAC7-224ENST00000488927 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
HDAC7-224ENST00000488927 HTRA4P83105 476 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-224ENST00000488927 ZC2HC1CQ53FD0 456 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-224ENST00000488927 MPZL3Q6UWV2 235 aa17.5■□□□□ 0.39
HDAC7-224ENST00000488927 MRPL10Q7Z7H8 261 aaKnown RBP17.5■□□□□ 0.39
HDAC7-224ENST00000488927 ZNF598Q86UK7 904 aaKnown RBP17.5■□□□□ 0.39
HDAC7-224ENST00000488927 GSDMAQ96QA5 445 aa17.5■□□□□ 0.39
HDAC7-224ENST00000488927 TCHPQ9BT92 498 aa17.5■□□□□ 0.39
HDAC7-224ENST00000488927 TARS2Q9BW92 718 aaKnown RBP17.5■□□□□ 0.39
HDAC7-224ENST00000488927 PTPRHQ9HD43 1115 aa17.5■□□□□ 0.39
HDAC7-224ENST00000488927 TTLL13PA6NNM8 815 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 CLDN3O15551 220 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 DGKIO75912 1065 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 NPTXRO95502 500 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 MBD3O95983 291 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 EDN1P05305 212 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 MYBP10242 640 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 MCF2P10911 925 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 PROZP22891 400 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 PNOCQ13519 176 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 KYAT1Q16773 422 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 ZNF568Q3ZCX4 644 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 SLFN12LQ6IEE8 588 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 ABI1Q8IZP0 508 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 RNF169Q8NCN4 708 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 SMARCE1Q969G3 411 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 EIF2AQ9BY44 585 aaKnown RBP17.49■□□□□ 0.39
HDAC7-224ENST00000488927 IPPQ9Y573 584 aa17.49■□□□□ 0.39
HDAC7-224ENST00000488927 TTC3P53804 2025 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 ITGA4P13612 1032 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 ATF7P17544 494 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 PTMSP20962 102 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 IBSPP21815 317 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 CASP5P51878 434 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 FAM109BQ6ICB4 259 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 FAM117BQ6P1L5 589 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 EPM2AIP1Q7L775 607 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 CDR2LQ86X02 465 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 CMTR2Q8IYT2 770 aaKnown RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 SYCP3Q8IZU3 236 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 SMG8Q8ND04 991 aaKnown RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 SPATA20Q8TB22 786 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 ZNF689Q96CS4 500 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-224ENST00000488927 PBX4Q9BYU1 374 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 TMEM117Q9H0C3 514 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 SLC39A2Q9NP94 309 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 ZMYM2Q9UBW7 1377 aa17.48■□□□□ 0.39
HDAC7-224ENST00000488927 GRXCR1A8MXD5 290 aa17.47■□□□□ 0.39
HDAC7-224ENST00000488927 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC7-224ENST00000488927 SNRPFP62306 86 aaKnown RBP17.47■□□□□ 0.39
HDAC7-224ENST00000488927 MCL1Q07820 350 aa17.47■□□□□ 0.39
HDAC7-224ENST00000488927 BMT2Q1RMZ1 405 aa17.47■□□□□ 0.39
HDAC7-224ENST00000488927 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
HDAC7-224ENST00000488927 EEF1DP3Q658K8 133 aa17.47■□□□□ 0.39
HDAC7-224ENST00000488927 GLB1LQ6UWU2 654 aa17.47■□□□□ 0.39
HDAC7-224ENST00000488927 TMCO2Q7Z6W1 182 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-224ENST00000488927 SP7Q8TDD2 431 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-224ENST00000488927 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
HDAC7-224ENST00000488927 MRPL9Q9BYD2 267 aaKnown RBP17.47■□□□□ 0.39
HDAC7-224ENST00000488927 CDT1Q9H211 546 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms