RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 IRF7Q92985 503 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 BCL11AQ9H165 835 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 BRD9Q9H8M2 597 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 CHST12Q9NRB3 414 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.75□□□□□ -1.01
RTCB-205ENST00000487704 CHST7Q9NS84 486 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 ECHDC1Q9NTX5 307 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 DKK4Q9UBT3 224 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 RAXQ9Y2V3 346 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 TEX15Q9BXT5 2789 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 TEP1Q99973 2627 aaKnown RBP8.75□□□□□ -1.01
RTCB-205ENST00000487704 CACNA1EQ15878 2313 aa8.75□□□□□ -1.01
RTCB-205ENST00000487704 ASCC3Q8N3C0 2202 aaKnown RBP8.74□□□□□ -1.01
RTCB-205ENST00000487704 PTPN13Q12923 2485 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 SHROOM3Q8TF72 1996 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 A0A087WV48 116 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 IGKV6D-21A0A0A0MT36 114 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 UPK3BL1B0FP48 263 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 UPK3BL2E5RIL1 263 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 NRP1O14786 923 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 KHNYNO15037 678 aaKnown RBP8.74□□□□□ -1.01
RTCB-205ENST00000487704 ZNF623O75123 536 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 DDHD2O94830 711 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 ATG7O95352 703 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 VTNP04004 478 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 POU2F2P09086 479 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 CCDC192P0DO97 292 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 SIM1P81133 766 aaPredicted RBP8.74□□□□□ -1.01
RTCB-205ENST00000487704 ZNF423Q2M1K9 1284 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 CCDC178Q5BJE1 867 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 DGKKQ5KSL6 1271 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 TANGO2Q6ICL3 276 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 PDXDC1Q6P996 788 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 PIP4P1Q86T03 277 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 MSANTD3Q96H12 275 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 PPP1R16BQ96T49 567 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 TRMT61BQ9BVS5 477 aaKnown RBP8.74□□□□□ -1.01
RTCB-205ENST00000487704 GBP3Q9H0R5 595 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 DUSP15Q9H1R2 295 aaPredicted RBP8.74□□□□□ -1.01
RTCB-205ENST00000487704 ZNF334Q9HCZ1 680 aaPredicted RBP8.74□□□□□ -1.01
RTCB-205ENST00000487704 JPH1Q9HDC5 661 aaPredicted RBP8.74□□□□□ -1.01
RTCB-205ENST00000487704 C2orf42Q9NWW7 574 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 KANSL3Q9P2N6 904 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 SLC9A2Q9UBY0 812 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 PIAS3Q9Y6X2 628 aa8.74□□□□□ -1.01
RTCB-205ENST00000487704 SPAARA0A1B0GVQ0 90 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 XYLBO75191 536 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 RHOBTB1O94844 696 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 C22orf31O95567 290 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 DARSP14868 501 aaKnown RBP8.73□□□□□ -1.01
RTCB-205ENST00000487704 CCNE1P24864 410 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 HOXC13P31276 330 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 NT5C2P49902 561 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 NLRP11P59045 1033 aaKnown RBP8.73□□□□□ -1.01
RTCB-205ENST00000487704 ACTR2P61160 394 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 CREB5Q02930 508 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 MTMR1Q13613 665 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 CCNI2Q6ZMN8 369 aaPredicted RBP8.73□□□□□ -1.01
RTCB-205ENST00000487704 ITPRIPQ8IWB1 547 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 SYNPOQ8N3V7 929 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 KAT14Q9H8E8 782 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 JADE2Q9NQC1 790 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 UBIAD1Q9Y5Z9 338 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 EVPLQ92817 2033 aa8.73□□□□□ -1.01
RTCB-205ENST00000487704 KLRF2D3W0D1 207 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 HMMRO75330 724 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 FGAP02671 866 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 CREMQ03060 361 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 KCNC4Q03721 635 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 ELF2Q15723 593 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 Q6ZS52 159 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 STAG2Q8N3U4 1231 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 LPPQ93052 612 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 RBM12Q9NTZ6 932 aaKnown RBP8.72□□□□□ -1.01
RTCB-205ENST00000487704 MARCH5Q9NX47 278 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 FBXW11Q9UKB1 542 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 PCDHB15Q9Y5E8 787 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 COL12A1Q99715 3063 aa8.72□□□□□ -1.01
RTCB-205ENST00000487704 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.02
RTCB-205ENST00000487704 MEIS3P2A8K0S8 358 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 MAGEB2O15479 319 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 MEFVO15553 781 aaPredicted RBP8.71□□□□□ -1.02
RTCB-205ENST00000487704 FCARP24071 287 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 IRX4P78413 519 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 SEMA3BQ13214 749 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 UVSSAQ2YD98 709 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 UAP1L1Q3KQV9 507 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 PABPC1LQ4VXU2 614 aaKnown RBP8.71□□□□□ -1.02
RTCB-205ENST00000487704 WDR44Q5JSH3 913 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 PPM1LQ5SGD2 360 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 VPS53Q5VIR6 699 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 POTEHQ6S545 545 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 MFSD6Q6ZSS7 791 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 RTL10Q7L3V2 364 aa8.71□□□□□ -1.02
RTCB-205ENST00000487704 IQCA1Q86XH1 822 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms