RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 ELF4Q99607 663 aaPredicted RBP4.45□□□□□ -1.7
SENP6-210ENST00000487548 PDCD2LQ9BRP1 358 aa4.45□□□□□ -1.7
SENP6-210ENST00000487548 TRIM39Q9HCM9 518 aa4.45□□□□□ -1.7
SENP6-210ENST00000487548 CABP5Q9NP86 173 aa4.45□□□□□ -1.7
SENP6-210ENST00000487548 TOMM22Q9NS69 142 aa4.45□□□□□ -1.7
SENP6-210ENST00000487548 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
SENP6-210ENST00000487548 COL11A2P13942 1736 aaPredicted RBP4.45□□□□□ -1.7
SENP6-210ENST00000487548 GAGE12BA1L429 117 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 PIPSLA2A3N6 862 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 GAGE12HA6NDE8 117 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 SPDEFO95238 335 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 ZSCAN20P17040 1043 aaPredicted RBP4.44□□□□□ -1.7
SENP6-210ENST00000487548 RESTQ13127 1097 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 ZCCHC8Q6NZY4 707 aaKnown RBP4.44□□□□□ -1.7
SENP6-210ENST00000487548 FAM98AQ8NCA5 519 aaKnown RBP4.44□□□□□ -1.7
SENP6-210ENST00000487548 DEPDC7Q96QD5 511 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 ADAM2Q99965 735 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 DUSP26Q9BV47 211 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 USP15Q9Y4E8 981 aaPredicted RBP4.44□□□□□ -1.7
SENP6-210ENST00000487548 SALL3Q9BXA9 1300 aa4.44□□□□□ -1.7
SENP6-210ENST00000487548 OPA1O60313 960 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 RAPGEF3O95398 923 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 LY86O95711 162 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 IGLV2-14P01704 120 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 HLA-DOAP06340 250 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 BMPR1AP36894 532 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 WNT3AP56704 352 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 MPP3Q13368 585 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 ZNF460Q14592 562 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 ZC3H12BQ5HYM0 836 aaKnown RBP4.43□□□□□ -1.7
SENP6-210ENST00000487548 METTL24Q5JXM2 366 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 ANKS6Q68DC2 871 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 DOK3Q7L591 496 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 KANSL1Q7Z3B3 1105 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 UNC5BQ8IZJ1 945 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 MSL3Q8N5Y2 521 aaKnown RBP4.43□□□□□ -1.7
SENP6-210ENST00000487548 CAGE1Q8TC20 777 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 SMG7Q92540 1137 aaKnown RBP4.43□□□□□ -1.7
SENP6-210ENST00000487548 DNAJC7Q99615 494 aa4.43□□□□□ -1.7
SENP6-210ENST00000487548 MRPL4Q9BYD3 311 aaKnown RBP4.43□□□□□ -1.7
SENP6-210ENST00000487548 USP36Q9P275 1121 aaKnown RBP4.43□□□□□ -1.7
SENP6-210ENST00000487548 DNAJC9-AS1A6NH13 148 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 MATN4O95460 622 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 ESRRBO95718 433 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 SPATA31D3P0C874 917 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 ADCY1Q08828 1119 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 PIK3R6Q5UE93 754 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 ABHD17BQ5VST6 288 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 SPATA31D4Q6ZUB0 917 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.42□□□□□ -1.7
SENP6-210ENST00000487548 H2AFY2Q9P0M6 372 aaPredicted RBP4.42□□□□□ -1.7
SENP6-210ENST00000487548 SIRPGQ9P1W8 387 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 PCDHB6Q9Y5E3 794 aa4.42□□□□□ -1.7
SENP6-210ENST00000487548 ZMYM3Q14202 1370 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 IGFALSP35858 605 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 MPLP40238 635 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 APBA1Q02410 837 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 MGAT5Q09328 741 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 RASA3Q14644 834 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 EFCAB12Q6NXP0 572 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 ZSWIM2Q8NEG5 633 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 TFAP2CQ92754 450 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 MTFR1LQ9H019 292 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 NCOA5Q9HCD5 579 aaKnown RBP4.41□□□□□ -1.7
SENP6-210ENST00000487548 SNTG2Q9NY99 539 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 DKK2Q9UBU2 259 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 FPGT-TNNI3KV9GXZ4 949 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 MYPNQ86TC9 1320 aa4.41□□□□□ -1.7
SENP6-210ENST00000487548 ST20-MTHFSA0A0A6YYL1 179 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 B4E1Z4 1266 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 MGST3O14880 152 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 PRAMEF4O60810 478 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 CLEC2LP0C7M8 214 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 MXRA7P84157 204 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 DDB1Q16531 1140 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 BTNL9Q6UXG8 535 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 MICALCLQ6ZW33 695 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 CDYL2Q8N8U2 506 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 SCARB1Q8WTV0 552 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 ZNF428Q96B54 188 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 Q96MF0 132 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 CDC5LQ99459 802 aaKnown RBP4.4□□□□□ -1.71
SENP6-210ENST00000487548 FDXACB1Q9BRP7 624 aaPredicted RBP4.4□□□□□ -1.71
SENP6-210ENST00000487548 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 PTCH2Q9Y6C5 1203 aa4.4□□□□□ -1.71
SENP6-210ENST00000487548 LRRC3CA6NJW4 275 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 DIRC3C9JPN6 131 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 ELL2O00472 640 aaPredicted RBP4.39□□□□□ -1.71
SENP6-210ENST00000487548 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
SENP6-210ENST00000487548 CDKL5O76039 1030 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 RBP3P10745 1247 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 EGR2P11161 476 aaPredicted RBP4.39□□□□□ -1.71
SENP6-210ENST00000487548 XPAP23025 273 aaPredicted RBP4.39□□□□□ -1.71
SENP6-210ENST00000487548 GTF2F1P35269 517 aaKnown RBP eCLIP4.39□□□□□ -1.71
SENP6-210ENST00000487548 ZNF81P51508 661 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 SIM1P81133 766 aaPredicted RBP4.39□□□□□ -1.71
SENP6-210ENST00000487548 FOXF2Q12947 444 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 LMBR1LQ6UX01 489 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 GPRIN1Q7Z2K8 1008 aa4.39□□□□□ -1.71
SENP6-210ENST00000487548 SRRM1Q8IYB3 904 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms