RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
SENP6-210ENST00000487548 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
SENP6-210ENST00000487548 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
SENP6-210ENST00000487548 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
SENP6-210ENST00000487548 FOXD1Q16676 465 aa19.32■□□□□ 0.68
SENP6-210ENST00000487548 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
SENP6-210ENST00000487548 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
SENP6-210ENST00000487548 MSH5O43196 834 aa18.07■□□□□ 0.48
SENP6-210ENST00000487548 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
SENP6-210ENST00000487548 ADRA2BP18089 450 aa17.98■□□□□ 0.47
SENP6-210ENST00000487548 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
SENP6-210ENST00000487548 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
SENP6-210ENST00000487548 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
SENP6-210ENST00000487548 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
SENP6-210ENST00000487548 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
SENP6-210ENST00000487548 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
SENP6-210ENST00000487548 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
SENP6-210ENST00000487548 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
SENP6-210ENST00000487548 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
SENP6-210ENST00000487548 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
SENP6-210ENST00000487548 RNF39Q9H2S5 420 aa15.41■□□□□ 0.06
SENP6-210ENST00000487548 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
SENP6-210ENST00000487548 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
SENP6-210ENST00000487548 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
SENP6-210ENST00000487548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.013e-7■□□□□ 10.1
SENP6-210ENST00000487548 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
SENP6-210ENST00000487548 KCNA4P22459 653 aa14.8□□□□□ -0.04
SENP6-210ENST00000487548 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
SENP6-210ENST00000487548 CAPN15O75808 1086 aa14.59□□□□□ -0.07
SENP6-210ENST00000487548 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
SENP6-210ENST00000487548 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
SENP6-210ENST00000487548 DSG3P32926 999 aa14.42□□□□□ -0.1
SENP6-210ENST00000487548 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
SENP6-210ENST00000487548 ABCB7O75027 752 aa14.27□□□□□ -0.13
SENP6-210ENST00000487548 APLP2Q06481 763 aa14.22□□□□□ -0.13
SENP6-210ENST00000487548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
SENP6-210ENST00000487548 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
SENP6-210ENST00000487548 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
SENP6-210ENST00000487548 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
SENP6-210ENST00000487548 POTEHQ6S545 545 aa14□□□□□ -0.17
SENP6-210ENST00000487548 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
SENP6-210ENST00000487548 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
SENP6-210ENST00000487548 POLA2Q14181 598 aa13.87□□□□□ -0.19
SENP6-210ENST00000487548 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
SENP6-210ENST00000487548 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
SENP6-210ENST00000487548 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
SENP6-210ENST00000487548 ZBTB22O15209 634 aa13.59□□□□□ -0.23
SENP6-210ENST00000487548 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
SENP6-210ENST00000487548 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
SENP6-210ENST00000487548 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
SENP6-210ENST00000487548 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
SENP6-210ENST00000487548 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
SENP6-210ENST00000487548 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
SENP6-210ENST00000487548 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
SENP6-210ENST00000487548 FBLN2P98095 1184 aa13.19□□□□□ -0.3
SENP6-210ENST00000487548 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
SENP6-210ENST00000487548 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
SENP6-210ENST00000487548 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
SENP6-210ENST00000487548 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
SENP6-210ENST00000487548 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
SENP6-210ENST00000487548 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
SENP6-210ENST00000487548 HAX1O00165 279 aa13.05□□□□□ -0.32
SENP6-210ENST00000487548 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.328e-6■□□□□ 10.6
SENP6-210ENST00000487548 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
SENP6-210ENST00000487548 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
SENP6-210ENST00000487548 SPDYE1Q8NFV5 336 aaPredicted RBP12.91□□□□□ -0.34
SENP6-210ENST00000487548 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
SENP6-210ENST00000487548 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
SENP6-210ENST00000487548 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
SENP6-210ENST00000487548 EVX2Q03828 476 aa12.84□□□□□ -0.35
SENP6-210ENST00000487548 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
SENP6-210ENST00000487548 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
SENP6-210ENST00000487548 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
SENP6-210ENST00000487548 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
SENP6-210ENST00000487548 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
SENP6-210ENST00000487548 GABBR2O75899 941 aa12.52□□□□□ -0.41
SENP6-210ENST00000487548 FARP1Q9Y4F1 1045 aaPredicted RBP12.48□□□□□ -0.41
SENP6-210ENST00000487548 CD44P16070 742 aaKnown RBP12.47□□□□□ -0.41
SENP6-210ENST00000487548 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
SENP6-210ENST00000487548 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
SENP6-210ENST00000487548 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
SENP6-210ENST00000487548 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
SENP6-210ENST00000487548 LHX8Q68G74 356 aa12.27□□□□□ -0.45
SENP6-210ENST00000487548 POTEIP0CG38 1075 aa12.24□□□□□ -0.45
SENP6-210ENST00000487548 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
SENP6-210ENST00000487548 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
SENP6-210ENST00000487548 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
SENP6-210ENST00000487548 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
SENP6-210ENST00000487548 CLCN6P51797 869 aa12.13□□□□□ -0.47
SENP6-210ENST00000487548 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
SENP6-210ENST00000487548 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
SENP6-210ENST00000487548 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
SENP6-210ENST00000487548 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
SENP6-210ENST00000487548 PROM2Q8N271 834 aa11.96□□□□□ -0.49
SENP6-210ENST00000487548 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
SENP6-210ENST00000487548 MIER1Q8N108 512 aa11.9□□□□□ -0.5
SENP6-210ENST00000487548 PELP1Q8IZL8 1130 aaKnown RBP11.89□□□□□ -0.51
SENP6-210ENST00000487548 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
SENP6-210ENST00000487548 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
SENP6-210ENST00000487548 OTUD5Q96G74 571 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms