RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 PCDHA5Q9Y5H7 936 aa16.09■□□□□ 0.17
APH1A-208ENST00000486720 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.16
APH1A-208ENST00000486720 TOM1L1O75674 476 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 EOMESO95936 686 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 MYBP10242 640 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 ATP2A2P16615 1042 aaKnown RBP16.08■□□□□ 0.16
APH1A-208ENST00000486720 FAM189BP81408 668 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 DCAF4L1Q3SXM0 396 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■□□□□ 8.4
APH1A-208ENST00000486720 NPAS4Q8IUM7 802 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 MYOCDQ8IZQ8 938 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 SYCP3Q8IZU3 236 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 SPATA20Q8TB22 786 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 GPT2Q8TD30 523 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 HPS3Q969F9 1004 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 PGBD4Q96DM1 585 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 TARS2Q9BW92 718 aaKnown RBP16.08■□□□□ 0.16
APH1A-208ENST00000486720 NUP62CLQ9H1M0 184 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 PDZD7Q9H5P4 517 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 SLC39A2Q9NP94 309 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 FAM105AQ9NUU6 356 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 TMEM161AQ9NX61 479 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
APH1A-208ENST00000486720 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.16
APH1A-208ENST00000486720 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 PDE4DIPQ5VU43 2346 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 ZNF623O75123 536 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 EDN1P05305 212 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 CASP5P51878 434 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 DEFB103AP81534 67 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 ZNF568Q3ZCX4 644 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 UBXN11Q5T124 520 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 MPZL3Q6UWV2 235 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
APH1A-208ENST00000486720 ECHDC2Q86YB7 292 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 TOP1MTQ969P6 601 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 TCHPQ9BT92 498 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
APH1A-208ENST00000486720 TTLL13PA6NNM8 815 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 CLDN3O15551 220 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 HOXA2O43364 376 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 PRPF6O94906 941 aaKnown RBP16.06■□□□□ 0.16
APH1A-208ENST00000486720 NPTXRO95502 500 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 MCF2P10911 925 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 PROZP22891 400 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 STK4Q13043 487 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 CAMK4Q16566 473 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 BMT2Q1RMZ1 405 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 SLFN12LQ6IEE8 588 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 HERC6Q8IVU3 1022 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 RSPH1Q8WYR4 309 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 FGFBP2Q9BYJ0 223 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 PTPRHQ9HD43 1115 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 KIAA1468Q9P260 1216 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
APH1A-208ENST00000486720 USP20Q9Y2K6 914 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 MICAL3Q7RTP6 2002 aa16.06■□□□□ 0.16
APH1A-208ENST00000486720 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 GJB5O95377 273 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 PPP1R2P41236 205 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 MATR3P43243 847 aaKnown RBP eCLIP16.05■□□□□ 0.16
APH1A-208ENST00000486720 SNRPFP62306 86 aaKnown RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 NOLC1Q14978 699 aaKnown RBP eCLIP16.05■□□□□ 0.16
APH1A-208ENST00000486720 KYAT1Q16773 422 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 ZNF658Q5TYW1 1059 aaPredicted RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 EEF1DP3Q658K8 133 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 MRPL10Q7Z7H8 261 aaKnown RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 CDR2LQ86X02 465 aaPredicted RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 TRIML1Q8N9V2 468 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 KIAA0895Q8NCT3 520 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 ERCC4Q92889 916 aaPredicted RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 SYAP1Q96A49 352 aaPredicted RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 ZBED2Q9BTP6 218 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 EIF2AQ9BY44 585 aaKnown RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 GBP3Q9H0R5 595 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 UBN1Q9NPG3 1134 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 CGNQ9P2M7 1197 aaKnown RBP16.05■□□□□ 0.16
APH1A-208ENST00000486720 ANKFY1Q9P2R3 1169 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 IPPQ9Y573 584 aa16.05■□□□□ 0.16
APH1A-208ENST00000486720 UPP2O95045 317 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 ITGA4P13612 1032 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 IBSPP21815 317 aaPredicted RBP16.04■□□□□ 0.16
APH1A-208ENST00000486720 MCL1Q07820 350 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 KCNA1Q09470 495 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 KNOP1Q1ED39 458 aaKnown RBP16.04■□□□□ 0.16
APH1A-208ENST00000486720 COBLL1Q53SF7 1204 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 HS2ST1Q7LGA3 356 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 ZNF598Q86UK7 904 aaKnown RBP16.04■□□□□ 0.16
APH1A-208ENST00000486720 CRIPAKQ8N1N5 446 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 GUF1Q8N442 669 aaKnown RBP16.04■□□□□ 0.16
APH1A-208ENST00000486720 RNF169Q8NCN4 708 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 GOLGA5Q8TBA6 731 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 CDT1Q9H211 546 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 MAN1B1Q9UKM7 699 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 STYXL1Q9Y6J8 313 aa16.04■□□□□ 0.16
APH1A-208ENST00000486720 TNRC18O15417 2968 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms