RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 RNF180Q86T96 592 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 PPFIBP1Q86W92 1011 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 VSTM4Q8IW00 320 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 FAM186BQ8IYM0 893 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 PCSK9Q8NBP7 692 aaKnown RBP13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 POMGNT1Q8WZA1 660 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 TMEM134Q9H6X4 195 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 HMX1Q9NP08 348 aaPredicted RBP13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 SETD4Q9NVD3 440 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 ARHGAP28Q9P2N2 729 aa13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.63□□□□□ -0.23
TSPAN1-208ENST00000482928 C17orf102A2RUQ5 167 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 LRRC10BA6NIK2 292 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 PURAQ00577 322 aaKnown RBP13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 CDC42EP1Q00587 391 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 NR1I3Q14994 352 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 MAPK6Q16659 721 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 VWA3BQ502W6 1294 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 DCAF17Q5H9S7 520 aaPredicted RBP13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 FAM47CQ5HY64 1035 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 SPECC1LQ69YQ0 1117 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 SLFN12LQ6IEE8 588 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 NFRKBQ6P4R8 1299 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 USP37Q86T82 979 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 IRF2BP1Q8IU81 584 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 XXYLT1Q8NBI6 393 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 LMBR1Q8WVP7 490 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 NLRP7Q8WX94 980 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 MKNK1Q9BUB5 465 aa13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSPAN1-208ENST00000482928 INO80B-WBP1J3KQ70 363 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 PRKCBP05771 671 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 CYP2C9P11712 490 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 DRP2Q13474 957 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 TRIM14Q14142 442 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 HS1BP3Q53T59 392 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 CCDC186Q7Z3E2 898 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 SLC9A9Q8IVB4 645 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 C12orf56Q8IXR9 622 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 ZC3H3Q8IXZ2 948 aaKnown RBP13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 CCDC150Q8NCX0 1101 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 INO80BQ9C086 356 aaPredicted RBP13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 NDST4Q9H3R1 872 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 HSPBP1Q9NZL4 362 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 ADGRA3Q8IWK6 1321 aa13.61□□□□□ -0.23
TSPAN1-208ENST00000482928 MYADML2A6NDP7 307 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 HAS3O00219 553 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 KIAA0391O15091 583 aaKnown RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 GARTP22102 1010 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 IRX5P78411 483 aaPredicted RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 NCBP1Q09161 790 aaKnown RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 CDCA2Q69YH5 1023 aaPredicted RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 CXCL17Q6UXB2 119 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 INTS8Q75QN2 995 aaKnown RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 KAT2BQ92831 832 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 PPP1R16BQ96T49 567 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 TCHPQ9BT92 498 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 CRISPLD2Q9H0B8 497 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 KIAA1586Q9HCI6 787 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 ANKFY1Q9P2R3 1169 aa13.6□□□□□ -0.23
TSPAN1-208ENST00000482928 KAT6AQ92794 2004 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 A0A1W2PQC6 194 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 M0QZ92 97 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 TEX33O43247 280 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 STX10O60499 249 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 CABYRO75952 493 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 AKAP3O75969 853 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 ERLIN2O94905 339 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 LDHAP00338 332 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 AFPP02771 609 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 VTNP04004 478 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 ASGR1P07306 291 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 SFPQP23246 707 aaKnown RBP eCLIP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 SMAD3P84022 425 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 POU5F1BQ06416 359 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 KCNA10Q16322 511 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 TSR1Q2NL82 804 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 MAP3K21Q5TCX8 1036 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 APTXQ7Z2E3 356 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 APBB1IPQ7Z5R6 666 aaPredicted RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 RSPH3Q86UC2 560 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 ZNF410Q86VK4 478 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 TRIM59Q8IWR1 403 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 GPD1LQ8N335 351 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 ANKLE1Q8NAG6 615 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 RDH13Q8NBN7 331 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 ARRDC4Q8NCT1 418 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms