RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 RGS18Q9NS28 235 aa7.46□□□□□ -1.22
COL11A1-209ENST00000475980 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.46□□□□□ -1.22
COL11A1-209ENST00000475980 NEUROG3Q9Y4Z2 214 aa7.46□□□□□ -1.22
COL11A1-209ENST00000475980 SUPT16HQ9Y5B9 1047 aaKnown RBP7.46□□□□□ -1.22
COL11A1-209ENST00000475980 PTPN13Q12923 2485 aa7.46□□□□□ -1.22
COL11A1-209ENST00000475980 MTCL1Q9Y4B5 1905 aaKnown RBP7.46□□□□□ -1.22
COL11A1-209ENST00000475980 PIEZO2Q9H5I5 2752 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 FAM170BA6NMN3 283 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 M0QZ92 97 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 THBS1P07996 1170 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 SLC3A2P08195 630 aaKnown RBP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 ZNF806P0C7X5 589 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 CTSAP10619 480 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 GNAT2P19087 354 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 RAB15P59190 212 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 FAM189BP81408 668 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 ZNF252P-AS1Q0IIN9 211 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 PPFIA1Q13136 1202 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 SIM2Q14190 667 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 UBXN2BQ14CS0 331 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 WTAPQ15007 396 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 WDR44Q5JSH3 913 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 MARCH8Q5T0T0 291 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 LRRC55Q6ZSA7 311 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 VSIG10LQ86VR7 867 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 PROSER1Q86XN7 944 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 TRIM50Q86XT4 487 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 CHMP4CQ96CF2 233 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 BBC3Q96PG8 261 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 PDCD2LQ9BRP1 358 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 SCNM1Q9BWG6 230 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 MTF2Q9Y483 593 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 TRPV2Q9Y5S1 764 aa7.45□□□□□ -1.22
COL11A1-209ENST00000475980 ZFP37Q9Y6Q3 630 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-209ENST00000475980 TICRRQ7Z2Z1 1910 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 TEX15Q9BXT5 2789 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 EIF4E1BA6NMX2 242 aaKnown RBP7.44□□□□□ -1.22
COL11A1-209ENST00000475980 MGEA5O60502 916 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 BCAR3O75815 825 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 CXCL14O95715 111 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 CAPNS1P04632 268 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 CHGBP05060 677 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 SNHG28P0DPA3 235 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 PDHBP11177 359 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 LAMP2P13473 410 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 TDO2P48775 406 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 NOVA1P51513 510 aaKnown RBP7.44□□□□□ -1.22
COL11A1-209ENST00000475980 HSD17B4P51659 736 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 CLCN4P51793 760 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 PFKPQ01813 784 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 ZNF543Q08ER8 600 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 MTAPQ13126 283 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 NEDD9Q14511 834 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 GRIK4Q16099 956 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 PRRT3Q5FWE3 981 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 ODR4Q5SWX8 454 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 STOX1Q6ZVD7 989 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 C12orf50Q8NA57 414 aaPredicted RBP7.44□□□□□ -1.22
COL11A1-209ENST00000475980 TMEM87AQ8NBN3 555 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 RSPH1Q8WYR4 309 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 TBC1D5Q92609 795 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 LOXL4Q96JB6 756 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 CASD1Q96PB1 797 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 CHRDQ9H2X0 955 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 BCAS3Q9H6U6 928 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 ATP6V0A4Q9HBG4 840 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 MAP3K20Q9NYL2 800 aaKnown RBP7.44□□□□□ -1.22
COL11A1-209ENST00000475980 ATXN7L1Q9ULK2 861 aaPredicted RBP7.44□□□□□ -1.22
COL11A1-209ENST00000475980 MSRB2Q9Y3D2 182 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 RNF114Q9Y508 228 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 NUMBLQ9Y6R0 609 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 WDR81Q562E7 1941 aa7.44□□□□□ -1.22
COL11A1-209ENST00000475980 TEP1Q99973 2627 aaKnown RBP7.43□□□□□ -1.22
COL11A1-209ENST00000475980 APC2O95996 2303 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 DENND3A2RUS2 1198 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 ERVH48-1M5A8F1 160 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 SORBS3O60504 671 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 FGFR1P11362 822 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 TOP1P11387 765 aaKnown RBP7.43□□□□□ -1.22
COL11A1-209ENST00000475980 TARSP26639 723 aaKnown RBP7.43□□□□□ -1.22
COL11A1-209ENST00000475980 PBX3P40426 434 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 GPC5P78333 572 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 C19orf57Q0VDD7 668 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 SNW1Q13573 536 aaKnown RBP7.43□□□□□ -1.22
COL11A1-209ENST00000475980 CCDC6Q16204 474 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 USH1GQ495M9 461 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 SLC44A4Q53GD3 710 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 PDXDC2PQ6P474 469 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 VPS52Q8N1B4 723 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 TMEM169Q96HH4 297 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 ADAM2Q99965 735 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 CELF4Q9BZC1 486 aaKnown RBP7.43□□□□□ -1.22
COL11A1-209ENST00000475980 RNF19AQ9NV58 838 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 STK39Q9UEW8 545 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 DPP7Q9UHL4 492 aa7.43□□□□□ -1.22
COL11A1-209ENST00000475980 MRPS17Q9Y2R5 130 aaKnown RBP7.43□□□□□ -1.22
COL11A1-209ENST00000475980 SDK1Q7Z5N4 2213 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms