RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 LRFN2Q9ULH4 789 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 EXOC7Q9UPT5 735 aa21.94■■□□□ 1.1
SF1-213ENST00000472725 EIF3DO15371 548 aaKnown RBP eCLIP21.93■■□□□ 1.1
SF1-213ENST00000472725 B4GALT5O43286 388 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 TOM1L1O75674 476 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 UBE4BO95155 1302 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 SMC2O95347 1197 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 GCNT3O95395 438 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 RPN1P04843 607 aaKnown RBP21.93■■□□□ 1.1
SF1-213ENST00000472725 RAB30Q15771 203 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 TMEM132AQ24JP5 1023 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 DCAF4L1Q3SXM0 396 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 UBXN11Q5T124 520 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 MRPL10Q7Z7H8 261 aaKnown RBP21.93■■□□□ 1.1
SF1-213ENST00000472725 CPB2Q96IY4 423 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 GSDMAQ96QA5 445 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 TMEM206Q9H813 350 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 INSL6Q9Y581 213 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 PCDHB2Q9Y5E7 798 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 PCDHA11Q9Y5I1 949 aa21.93■■□□□ 1.1
SF1-213ENST00000472725 ZMYM2Q9UBW7 1377 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 RHOBTB3O94955 611 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 CASP1P29466 404 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 HTRA4P83105 476 aaPredicted RBP21.92■■□□□ 1.1
SF1-213ENST00000472725 L1TD1Q5T7N2 865 aaKnown RBP21.92■■□□□ 1.1
SF1-213ENST00000472725 ZNF598Q86UK7 904 aaKnown RBP21.92■■□□□ 1.1
SF1-213ENST00000472725 ACCSQ96QU6 501 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 RAD9AQ99638 391 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 ZBED2Q9BTP6 218 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 TRIM6Q9C030 488 aaPredicted RBP21.92■■□□□ 1.1
SF1-213ENST00000472725 PDZD7Q9H5P4 517 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 PTPRHQ9HD43 1115 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 UBN1Q9NPG3 1134 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 RMND1Q9NWS8 449 aa21.92■■□□□ 1.1
SF1-213ENST00000472725 COL4A6Q14031 1691 aa21.91■■□□□ 1.1
SF1-213ENST00000472725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.91■■□□□ 1.1
SF1-213ENST00000472725 PRR29P0C7W0 189 aa21.91■■□□□ 1.1
SF1-213ENST00000472725 PROZP22891 400 aa21.91■■□□□ 1.1
SF1-213ENST00000472725 KMT5BQ4FZB7 885 aa21.91■■□□□ 1.1
SF1-213ENST00000472725 SPATA20Q8TB22 786 aa21.91■■□□□ 1.1
SF1-213ENST00000472725 TARS2Q9BW92 718 aaKnown RBP21.91■■□□□ 1.1
SF1-213ENST00000472725 TBC1D7Q9P0N9 293 aa21.91■■□□□ 1.1
SF1-213ENST00000472725 HNRNPDLO14979 420 aaKnown RBP21.9■■□□□ 1.1
SF1-213ENST00000472725 DGKIO75912 1065 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 KIF20AO95235 890 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 EDN1P05305 212 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 MCF2P10911 925 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 LIG4P49917 911 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 ZC2HC1CQ53FD0 456 aaPredicted RBP21.9■■□□□ 1.1
SF1-213ENST00000472725 SLFN12LQ6IEE8 588 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 MPZL3Q6UWV2 235 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 EPM2AIP1Q7L775 607 aaPredicted RBP21.9■■□□□ 1.1
SF1-213ENST00000472725 ZNF507Q8TCN5 953 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 BICD1Q96G01 975 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 MSRAQ9UJ68 235 aa21.9■■□□□ 1.1
SF1-213ENST00000472725 TTLL13PA6NNM8 815 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 TLL1O43897 1013 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 UPP2O95045 317 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 MBD3O95983 291 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 SNRPFP62306 86 aaKnown RBP21.89■■□□□ 1.09
SF1-213ENST00000472725 PNOCQ13519 176 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 KYAT1Q16773 422 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 BMT2Q1RMZ1 405 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 SMARCE1Q969G3 411 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 ZNF689Q96CS4 500 aaPredicted RBP21.89■■□□□ 1.09
SF1-213ENST00000472725 IPPQ9Y573 584 aa21.89■■□□□ 1.09
SF1-213ENST00000472725 CLDN3O15551 220 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 NPTXRO95502 500 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 MYBP10242 640 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 ATF7P17544 494 aaPredicted RBP21.88■■□□□ 1.09
SF1-213ENST00000472725 PTMSP20962 102 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 CASP5P51878 434 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 MCL1Q07820 350 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 ZNF568Q3ZCX4 644 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 CMTR2Q8IYT2 770 aaKnown RBP21.88■■□□□ 1.09
SF1-213ENST00000472725 SMG8Q8ND04 991 aaKnown RBP21.88■■□□□ 1.09
SF1-213ENST00000472725 SP7Q8TDD2 431 aaPredicted RBP21.88■■□□□ 1.09
SF1-213ENST00000472725 YME1L1Q96TA2 773 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 TCHPQ9BT92 498 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 EIF2AQ9BY44 585 aaKnown RBP21.88■■□□□ 1.09
SF1-213ENST00000472725 TMEM117Q9H0C3 514 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 RC3H2Q9HBD1 1191 aaKnown RBP21.88■■□□□ 1.09
SF1-213ENST00000472725 GIT1Q9Y2X7 761 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 STYXL1Q9Y6J8 313 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 GBF1Q92538 1859 aa21.88■■□□□ 1.09
SF1-213ENST00000472725 TMEM265A0A087WTH1 108 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 ABLIM1O14639 778 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 ITGA4P13612 1032 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 MCM4P33991 863 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 NOLC1Q14978 699 aaKnown RBP eCLIP21.87■■□□□ 1.09
SF1-213ENST00000472725 HABP4Q5JVS0 413 aaKnown RBP21.87■■□□□ 1.09
SF1-213ENST00000472725 EEF1DP3Q658K8 133 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 FAM109BQ6ICB4 259 aaPredicted RBP21.87■■□□□ 1.09
SF1-213ENST00000472725 ABI1Q8IZP0 508 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 SYCP3Q8IZU3 236 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 CDT1Q9H211 546 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 SLC39A2Q9NP94 309 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 CGNQ9P2M7 1197 aaKnown RBP21.87■■□□□ 1.09
SF1-213ENST00000472725 PCDHA5Q9Y5H7 936 aa21.87■■□□□ 1.09
SF1-213ENST00000472725 FNDC1Q4ZHG4 1894 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms