RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 STRA6Q9BX79 667 aa15.41■□□□□ 0.06
SSR4-207ENST00000471724 RGS18Q9NS28 235 aa15.41■□□□□ 0.06
SSR4-207ENST00000471724 KIAA1468Q9P260 1216 aa15.41■□□□□ 0.06
SSR4-207ENST00000471724 TNFSF13BQ9Y275 285 aa15.41■□□□□ 0.06
SSR4-207ENST00000471724 A0A1B0GUA9 196 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 SOX1O00570 391 aaPredicted RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 MGEA5O60502 916 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 TOM1L1O75674 476 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 PPP1R2P41236 205 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 SARSP49591 514 aaKnown RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 WDR5P61964 334 aaKnown RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 BMT2Q1RMZ1 405 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 KLHL40Q2TBA0 621 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 SKOR2Q2VWA4 1001 aaPredicted RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 ZNF568Q3ZCX4 644 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 CCDC183Q5T5S1 534 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 ZNF658Q5TYW1 1059 aaPredicted RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 SLC24A5Q71RS6 500 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 C16orf59Q7L2K0 433 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 HACE1Q8IYU2 909 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 SYCP3Q8IZU3 236 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 KIAA0895Q8NCT3 520 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 LINC01599Q8WXQ3 324 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 HPS3Q969F9 1004 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 LRCH3Q96II8 777 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 CPB2Q96IY4 423 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 SLC9A7Q96T83 725 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 ACO2Q99798 780 aaKnown RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 FGFBP2Q9BYJ0 223 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 PDZD7Q9H5P4 517 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 SLC39A2Q9NP94 309 aa15.4■□□□□ 0.06
SSR4-207ENST00000471724 PDCD11Q14690 1871 aaKnown RBP15.4■□□□□ 0.06
SSR4-207ENST00000471724 TDRD15B5MCY1 1934 aaKnown RBP15.39■□□□□ 0.05
SSR4-207ENST00000471724 COL4A6Q14031 1691 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 EDN1P05305 212 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 STAG3L1P0CL83 205 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 SMAD3P84022 425 aaKnown RBP15.39■□□□□ 0.05
SSR4-207ENST00000471724 STIM1Q13586 685 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 TCTN1Q2MV58 587 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 MPZL3Q6UWV2 235 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 MYOCDQ8IZQ8 938 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 ZNF507Q8TCN5 953 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 ERCC4Q92889 916 aaPredicted RBP15.39■□□□□ 0.05
SSR4-207ENST00000471724 TARS2Q9BW92 718 aaKnown RBP15.39■□□□□ 0.05
SSR4-207ENST00000471724 FAM105AQ9NUU6 356 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 ANKFY1Q9P2R3 1169 aa15.39■□□□□ 0.05
SSR4-207ENST00000471724 FNDC1Q4ZHG4 1894 aaPredicted RBP15.39■□□□□ 0.05
SSR4-207ENST00000471724 ZMYM2Q9UBW7 1377 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 A0A0U1RQF3 1178 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.38■□□□□ 0.05
SSR4-207ENST00000471724 C9IYK1 514 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 PRPF6O94906 941 aaKnown RBP15.38■□□□□ 0.05
SSR4-207ENST00000471724 SNRPFP62306 86 aaKnown RBP15.38■□□□□ 0.05
SSR4-207ENST00000471724 STK4Q13043 487 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 NOLC1Q14978 699 aaKnown RBP eCLIP15.38■□□□□ 0.05
SSR4-207ENST00000471724 COBLL1Q53SF7 1204 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 RASIP1Q5U651 963 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 SLFN12LQ6IEE8 588 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 HS2ST1Q7LGA3 356 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 NPAS4Q8IUM7 802 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 GUF1Q8N442 669 aaKnown RBP15.38■□□□□ 0.05
SSR4-207ENST00000471724 GLIS3Q8NEA6 775 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 GOLGA5Q8TBA6 731 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 SCFD1Q8WVM8 642 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 RSPH1Q8WYR4 309 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 GBP3Q9H0R5 595 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 ELAC1Q9H777 363 aaKnown RBP15.38■□□□□ 0.05
SSR4-207ENST00000471724 TMEM161AQ9NX61 479 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 CGNQ9P2M7 1197 aaKnown RBP15.38■□□□□ 0.05
SSR4-207ENST00000471724 MAN1B1Q9UKM7 699 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 SLC4A7Q9Y6M7 1214 aa15.38■□□□□ 0.05
SSR4-207ENST00000471724 ANK1P16157 1881 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.37■□□□□ 0.05
SSR4-207ENST00000471724 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.37■□□□□ 0.05
SSR4-207ENST00000471724 TTLL13PA6NNM8 815 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 ENPP3O14638 875 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 CLDN3O15551 220 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 HOXA2O43364 376 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 NPTXRO95502 500 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 MCF2P10911 925 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 PROZP22891 400 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 MATR3P43243 847 aaKnown RBP eCLIP15.37■□□□□ 0.05
SSR4-207ENST00000471724 HSP90AA2PQ14568 343 aaPredicted RBP15.37■□□□□ 0.05
SSR4-207ENST00000471724 KYAT1Q16773 422 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 KNOP1Q1ED39 458 aaKnown RBP15.37■□□□□ 0.05
SSR4-207ENST00000471724 FAM109BQ6ICB4 259 aaPredicted RBP15.37■□□□□ 0.05
SSR4-207ENST00000471724 CAVIN1Q6NZI2 390 aaKnown RBP15.37■□□□□ 0.05
SSR4-207ENST00000471724 ECHDC2Q86YB7 292 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 PHOSPHO2Q8TCD6 241 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 PGBD4Q96DM1 585 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 TCHPQ9BT92 498 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 CDT1Q9H211 546 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 LRFN2Q9ULH4 789 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 GDAQ9Y2T3 454 aa15.37■□□□□ 0.05
SSR4-207ENST00000471724 RANBP2P49792 3224 aaKnown RBP15.37■□□□□ 0.05
SSR4-207ENST00000471724 TRIP11Q15643 1979 aa15.36■□□□□ 0.05
SSR4-207ENST00000471724 PSMA7O14818 248 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms