RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TTC3P53804 2025 aa15.88■□□□□ 0.13
DNMT3A-208ENST00000466601 TLL1O43897 1013 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 KINO60870 393 aaKnown RBP15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 PPP1R37O75864 691 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 GCNT3O95395 438 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 NPTXRO95502 500 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 EOMESO95936 686 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 RPN1P04843 607 aaKnown RBP15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 MYBP10242 640 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 EHHADHQ08426 723 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 DPYDQ12882 1025 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 POSTNQ15063 836 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 KMT5BQ4FZB7 885 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 FAM26FQ5R3K3 315 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 EEF1DP3Q658K8 133 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 ZNF598Q86UK7 904 aaKnown RBP15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 RNF169Q8NCN4 708 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 HPS3Q969F9 1004 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 HVCN1Q96D96 273 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 ADPGKQ9BRR6 497 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 STRA6Q9BX79 667 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 FGFBP2Q9BYJ0 223 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 PBX4Q9BYU1 374 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 TRIM6Q9C030 488 aaPredicted RBP15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 MSRAQ9UJ68 235 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 INSL6Q9Y581 213 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 PCDHB13Q9Y5F0 798 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 PCDHA11Q9Y5I1 949 aa15.87■□□□□ 0.13
DNMT3A-208ENST00000466601 PTPRSQ13332 1948 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 DGKIO75912 1065 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 ATF7P17544 494 aaPredicted RBP15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 PBX2P40425 430 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 CASP5P51878 434 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 HTRA4P83105 476 aaPredicted RBP15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 ALCAMQ13740 583 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 RAB30Q15771 203 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 ZPBP2Q6X784 338 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 MRPL10Q7Z7H8 261 aaKnown RBP15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 MAP4K3Q8IVH8 894 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 ELOA2Q8IYF1 753 aaPredicted RBP15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 SMG8Q8ND04 991 aaKnown RBP15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 CCDC47Q96A33 483 aaKnown RBP15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 PGBD4Q96DM1 585 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 BICD1Q96G01 975 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 YME1L1Q96TA2 773 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 EXOC1Q9NV70 894 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 HOOK1Q9UJC3 728 aaKnown RBP15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 IPPQ9Y573 584 aa15.86■□□□□ 0.13
DNMT3A-208ENST00000466601 SOX1O00570 391 aaPredicted RBP15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 TOM1L1O75674 476 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 PIGRP01833 764 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 FGFR1P11362 822 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 MYOGP15173 224 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 LIG4P49917 911 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 PSMD2Q13200 908 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 PNOCQ13519 176 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 DCAF4L1Q3SXM0 396 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 L1TD1Q5T7N2 865 aaKnown RBP15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 STXBP4Q6ZWJ1 553 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 APBB1IPQ7Z5R6 666 aaPredicted RBP15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 GLIS3Q8NEA6 775 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 LPPQ93052 612 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 ZNF689Q96CS4 500 aaPredicted RBP15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 ACCSQ96QU6 501 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 TCHPQ9BT92 498 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 PTPRHQ9HD43 1115 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 SLC39A2Q9NP94 309 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 EXOC7Q9UPT5 735 aa15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 YBX2Q9Y2T7 364 aaKnown RBP15.85■□□□□ 0.13
DNMT3A-208ENST00000466601 ABLIM1O14639 778 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 HNRNPDLO14979 420 aaKnown RBP15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 HOXA2O43364 376 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 PRPF6O94906 941 aaKnown RBP15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 ITGA4P13612 1032 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 PROZP22891 400 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 DNAJB2P25686 324 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 GATMP50440 423 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 KCNA1Q09470 495 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 ZNF568Q3ZCX4 644 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 MPZL3Q6UWV2 235 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 ZBTB33Q86T24 672 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 HACE1Q8IYU2 909 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 ZBTB45Q96K62 511 aaPredicted RBP15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 CDT1Q9H211 546 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 NKX2-4Q9H2Z4 354 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 NXF3Q9H4D5 531 aaKnown RBP15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 RC3H2Q9HBD1 1191 aaKnown RBP15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 HES2Q9Y543 173 aa15.84■□□□□ 0.13
DNMT3A-208ENST00000466601 LCHNA4D1U4 455 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 TBKBP1A7MCY6 615 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 MEIS3P2A8K0S8 358 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 EIF3DO15371 548 aaKnown RBP eCLIP15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 CLDN3O15551 220 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 RHOBTB3O94955 611 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 SMC2O95347 1197 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 CA3P07451 260 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 MCF2P10911 925 aa15.83■□□□□ 0.12
DNMT3A-208ENST00000466601 MATR3P43243 847 aaKnown RBP eCLIP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms