RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 PDZD7Q9H5P4 517 aa19.11■□□□□ 0.65
HDAC11-202ENST00000402259 GBF1Q92538 1859 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 TTLL13PA6NNM8 815 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 RBAK-RBAKDNI3L0D1 243 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 EIF3DO15371 548 aaKnown RBP eCLIP19.1■□□□□ 0.65
HDAC11-202ENST00000402259 PRR29P0C7W0 189 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 HTRA4P83105 476 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-202ENST00000402259 KCNB1Q14721 858 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 MRPL10Q7Z7H8 261 aaKnown RBP19.1■□□□□ 0.65
HDAC11-202ENST00000402259 ADPGKQ9BRR6 497 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 PTPRHQ9HD43 1115 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 EXOC1Q9NV70 894 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 LRFN2Q9ULH4 789 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 PCDHB7Q9Y5E2 793 aa19.1■□□□□ 0.65
HDAC11-202ENST00000402259 RANBP2P49792 3224 aaKnown RBP19.1■□□□□ 0.65
HDAC11-202ENST00000402259 UBE4BO95155 1302 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.09■□□□□ 0.65
HDAC11-202ENST00000402259 HOXA2O43364 376 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 TOM1L1O75674 476 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 RHOBTB3O94955 611 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 GCNT3O95395 438 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 RPN1P04843 607 aaKnown RBP19.09■□□□□ 0.65
HDAC11-202ENST00000402259 PROZP22891 400 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 RAB30Q15771 203 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 TMEM132AQ24JP5 1023 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 DCAF4L1Q3SXM0 396 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 KMT5BQ4FZB7 885 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 ZC2HC1CQ53FD0 456 aaPredicted RBP19.09■□□□□ 0.65
HDAC11-202ENST00000402259 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
HDAC11-202ENST00000402259 EPM2AIP1Q7L775 607 aaPredicted RBP19.09■□□□□ 0.65
HDAC11-202ENST00000402259 SPATA20Q8TB22 786 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 PGBD4Q96DM1 585 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 RAD9AQ99638 391 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 TARS2Q9BW92 718 aaKnown RBP19.09■□□□□ 0.65
HDAC11-202ENST00000402259 TBC1D7Q9P0N9 293 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 EXOC7Q9UPT5 735 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 PCDHB2Q9Y5E7 798 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 PCDHA11Q9Y5I1 949 aa19.09■□□□□ 0.65
HDAC11-202ENST00000402259 ZMYM2Q9UBW7 1377 aa19.08■□□□□ 0.65
HDAC11-202ENST00000402259 DGKIO75912 1065 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 SMC2O95347 1197 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 MYBP10242 640 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 ATF7P17544 494 aaPredicted RBP19.08■□□□□ 0.64
HDAC11-202ENST00000402259 CASP5P51878 434 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 FAM109BQ6ICB4 259 aaPredicted RBP19.08■□□□□ 0.64
HDAC11-202ENST00000402259 MPZL3Q6UWV2 235 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 HACE1Q8IYU2 909 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 ZNF507Q8TCN5 953 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 ZNF689Q96CS4 500 aaPredicted RBP19.08■□□□□ 0.64
HDAC11-202ENST00000402259 GSDMAQ96QA5 445 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 ACCSQ96QU6 501 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 EIF2AQ9BY44 585 aaKnown RBP19.08■□□□□ 0.64
HDAC11-202ENST00000402259 TRIM6Q9C030 488 aaPredicted RBP19.08■□□□□ 0.64
HDAC11-202ENST00000402259 TMEM206Q9H813 350 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 RC3H2Q9HBD1 1191 aaKnown RBP19.08■□□□□ 0.64
HDAC11-202ENST00000402259 INSL6Q9Y581 213 aa19.08■□□□□ 0.64
HDAC11-202ENST00000402259 ABLIM1O14639 778 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 HNRNPDLO14979 420 aaKnown RBP19.07■□□□□ 0.64
HDAC11-202ENST00000402259 UPP2O95045 317 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 MCF2P10911 925 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 LIG4P49917 911 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 PNOCQ13519 176 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 BMT2Q1RMZ1 405 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 EEF1DP3Q658K8 133 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 SMG8Q8ND04 991 aaKnown RBP19.07■□□□□ 0.64
HDAC11-202ENST00000402259 SP7Q8TDD2 431 aaPredicted RBP19.07■□□□□ 0.64
HDAC11-202ENST00000402259 HPS3Q969F9 1004 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 BICD1Q96G01 975 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 ZBED2Q9BTP6 218 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 FGFBP2Q9BYJ0 223 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 GTPBP4Q9BZE4 634 aaKnown RBP19.07■□□□□ 0.64
HDAC11-202ENST00000402259 UBN1Q9NPG3 1134 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 RMND1Q9NWS8 449 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 USP20Q9Y2K6 914 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 IPPQ9Y573 584 aa19.07■□□□□ 0.64
HDAC11-202ENST00000402259 FNDC1Q4ZHG4 1894 aaPredicted RBP19.07■□□□□ 0.64
HDAC11-202ENST00000402259 GRXCR1A8MXD5 290 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 TLL1O43897 1013 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 NPTXRO95502 500 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 MCL1Q07820 350 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 ZNF568Q3ZCX4 644 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 HABP4Q5JVS0 413 aaKnown RBP19.06■□□□□ 0.64
HDAC11-202ENST00000402259 TMCO2Q7Z6W1 182 aaPredicted RBP19.06■□□□□ 0.64
HDAC11-202ENST00000402259 CDR2LQ86X02 465 aaPredicted RBP19.06■□□□□ 0.64
HDAC11-202ENST00000402259 YME1L1Q96TA2 773 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 CDT1Q9H211 546 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 MSRAQ9UJ68 235 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 STYXL1Q9Y6J8 313 aa19.06■□□□□ 0.64
HDAC11-202ENST00000402259 CLDN3O15551 220 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 MBD3O95983 291 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 ITGA4P13612 1032 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 MCM4P33991 863 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 STK4Q13043 487 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 NOLC1Q14978 699 aaKnown RBP eCLIP19.05■□□□□ 0.64
HDAC11-202ENST00000402259 SLFN12LQ6IEE8 588 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 FAM117BQ6P1L5 589 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 CMTR2Q8IYT2 770 aaKnown RBP19.05■□□□□ 0.64
HDAC11-202ENST00000402259 SMARCE1Q969G3 411 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 PBX4Q9BYU1 374 aa19.05■□□□□ 0.64
HDAC11-202ENST00000402259 TMEM117Q9H0C3 514 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms