RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 GRAMD1CQ8IYS0 662 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 RSPH1Q8WYR4 309 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 FIZ1Q96SL8 496 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 ADPGKQ9BRR6 497 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 TRIM6Q9C030 488 aaPredicted RBP13.1□□□□□ -0.31
PCNA-201ENST00000379143 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 TMEM161AQ9NX61 479 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 TBX20Q9UMR3 447 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
PCNA-201ENST00000379143 B4GALT5O43286 388 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 HOXA2O43364 376 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 ZNF623O75123 536 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 GJB5O95377 273 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 GCNT3O95395 438 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 NMT1P30419 496 aaKnown RBP13.09□□□□□ -0.31
PCNA-201ENST00000379143 SMAD3P84022 425 aaKnown RBP13.09□□□□□ -0.31
PCNA-201ENST00000379143 PSMD2Q13200 908 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 POSTNQ15063 836 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 ATF7IP2Q5U623 682 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 ECHDC2Q86YB7 292 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 CPB2Q96IY4 423 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 EXOC1Q9NV70 894 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 EXOC7Q9UPT5 735 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
PCNA-201ENST00000379143 EIF3DO15371 548 aaKnown RBP eCLIP13.08□□□□□ -0.329e-39■■■□□ 18.9
PCNA-201ENST00000379143 TLL1O43897 1013 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 UPP2O95045 317 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
PCNA-201ENST00000379143 CASP1P29466 404 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 EHHADHQ08426 723 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 DPYDQ12882 1025 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 RAB30Q15771 203 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 DCAF4L1Q3SXM0 396 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 MAP4K3Q8IVH8 894 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 CRIPAKQ8N1N5 446 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 BICD1Q96G01 975 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 RAD9AQ99638 391 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 ACO2Q99798 780 aaKnown RBP13.08□□□□□ -0.32
PCNA-201ENST00000379143 STRA6Q9BX79 667 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 PDZD7Q9H5P4 517 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 UBN1Q9NPG3 1134 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 RMND1Q9NWS8 449 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 PCDHB2Q9Y5E7 798 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 PCDHA11Q9Y5I1 949 aa13.08□□□□□ -0.32
PCNA-201ENST00000379143 PTPRSQ13332 1948 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 TTC3P53804 2025 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 HNRNPDLO14979 420 aaKnown RBP13.07□□□□□ -0.32
PCNA-201ENST00000379143 KLRC4O43908 158 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 TOM1L1O75674 476 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 PPP1R37O75864 691 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 DGKIO75912 1065 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 SMC2O95347 1197 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 PIGRP01833 764 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 LIG4P49917 911 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 HTRA4P83105 476 aaPredicted RBP13.07□□□□□ -0.32
PCNA-201ENST00000379143 KCNB1Q14721 858 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
PCNA-201ENST00000379143 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
PCNA-201ENST00000379143 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 GUCD1Q96NT3 240 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 GSDMAQ96QA5 445 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 ACCSQ96QU6 501 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 TCHPQ9BT92 498 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 TARS2Q9BW92 718 aaKnown RBP13.07□□□□□ -0.32
PCNA-201ENST00000379143 GTPBP4Q9BZE4 634 aaKnown RBP13.07□□□□□ -0.32
PCNA-201ENST00000379143 TBC1D7Q9P0N9 293 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 MSRAQ9UJ68 235 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 UBE4BO95155 1302 aa13.07□□□□□ -0.32
PCNA-201ENST00000379143 COL4A6Q14031 1691 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 CLDN3O15551 220 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 RHOBTB3O94955 611 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 KIF20AO95235 890 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 NPTXRO95502 500 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 EDN1P05305 212 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 MCF2P10911 925 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 PROZP22891 400 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 PNOCQ13519 176 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 FAM109BQ6ICB4 259 aaPredicted RBP13.06□□□□□ -0.32
PCNA-201ENST00000379143 FAM117BQ6P1L5 589 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 MRPL10Q7Z7H8 261 aaKnown RBP13.06□□□□□ -0.32
PCNA-201ENST00000379143 ZNF598Q86UK7 904 aaKnown RBP13.06□□□□□ -0.32
PCNA-201ENST00000379143 ABI1Q8IZP0 508 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms