RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ZNF507Q8TCN5 953 aa15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 NUP62CLQ9H1M0 184 aa15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 PTPRHQ9HD43 1115 aa15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 TBC1D7Q9P0N9 293 aa15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 CGNQ9P2M7 1197 aaKnown RBP15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 SLC4A7Q9Y6M7 1214 aa15.17■□□□□ 0.02
NSMCE1-201ENST00000361439 ZMYM2Q9UBW7 1377 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 HNRNPDLO14979 420 aaKnown RBP15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 B4GALT5O43286 388 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 MGEA5O60502 916 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 PPP1R2P41236 205 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 STK4Q13043 487 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 SHHQ15465 462 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 TMEM132AQ24JP5 1023 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 TCTN1Q2MV58 587 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 ZC2HC1CQ53FD0 456 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 NPAS4Q8IUM7 802 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 HACE1Q8IYU2 909 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 CRIPAKQ8N1N5 446 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 LINC01599Q8WXQ3 324 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 PGBD4Q96DM1 585 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 BICD1Q96G01 975 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 PDZD7Q9H5P4 517 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 SLC39A2Q9NP94 309 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 UBN1Q9NPG3 1134 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 TMEM161AQ9NX61 479 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 STYXL1Q9Y6J8 313 aa15.16■□□□□ 0.02
NSMCE1-201ENST00000361439 ZBBXA8MT70 800 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 KIAA0391O15091 583 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 HOXA2O43364 376 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 MYBP10242 640 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 MCF2P10911 925 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 LIG4P49917 911 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 CASP5P51878 434 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 MCL1Q07820 350 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 HSP90AA2PQ14568 343 aaPredicted RBP15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 CAMK4Q16566 473 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 KYAT1Q16773 422 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 KLHL40Q2TBA0 621 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 C9orf50Q5SZB4 431 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 UBXN11Q5T124 520 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 ZNF658Q5TYW1 1059 aaPredicted RBP15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 MPZL3Q6UWV2 235 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 MRPL10Q7Z7H8 261 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 KIAA0895Q8NCT3 520 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 GOLGA5Q8TBA6 731 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 TMEM174Q8WUU8 243 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 SCFD1Q8WVM8 642 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 SYAP1Q96A49 352 aaPredicted RBP15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 CPB2Q96IY4 423 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 TARS2Q9BW92 718 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 TRIM6Q9C030 488 aaPredicted RBP15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 PCDHB7Q9Y5E2 793 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 PCDHB2Q9Y5E7 798 aa15.15■□□□□ 0.02
NSMCE1-201ENST00000361439 RANBP2P49792 3224 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 CLDN3O15551 220 aa15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 EDN1P05305 212 aa15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 ATP2A2P16615 1042 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 POU5F1Q01860 360 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 KNOP1Q1ED39 458 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 RBM43Q6ZSC3 357 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 ZNF598Q86UK7 904 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 ECHDC2Q86YB7 292 aa15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 MYOCDQ8IZQ8 938 aa15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 SYCP3Q8IZU3 236 aa15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 GUF1Q8N442 669 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 GBP3Q9H0R5 595 aa15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 CXXC1Q9P0U4 656 aaPredicted RBP15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 LRFN2Q9ULH4 789 aa15.14■□□□□ 0.01
NSMCE1-201ENST00000361439 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 TTLL13PA6NNM8 815 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 ABLIM1O14639 778 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 PRPF6O94906 941 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 GJB5O95377 273 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 GARTP22102 1010 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 TTC3P53804 2025 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 MORC3Q14149 939 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 CCDC183Q5T5S1 534 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 MICAL3Q7RTP6 2002 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 HPS3Q969F9 1004 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 TCHPQ9BT92 498 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 FGFBP2Q9BYJ0 223 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 PCDH10Q9P2E7 1040 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 IPPQ9Y573 584 aa15.13■□□□□ 0.01
NSMCE1-201ENST00000361439 A0A0B4J269 797 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 PDXKO00764 312 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 LETM1O95202 739 aaPredicted RBP15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 LDHAP00338 332 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 DEFB103AP81534 67 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 KCNA1Q09470 495 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 215.7 ms