RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 USP6NLQ92738 828 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 DEPDC7Q96QD5 511 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 NFU1Q9UMS0 254 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 URB2Q14146 1524 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 ZNF445P59923 1031 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 CDK17Q00537 523 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PTH1RQ03431 593 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 HS6ST3Q8IZP7 471 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 DCTN4Q9UJW0 460 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 FBXO2Q9UK22 296 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 RRP15Q9Y3B9 282 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 ABCC4O15439 1325 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PNMA6FA0A0J9YX94 578 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 HSD17B4P51659 736 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 TRIP4Q15650 581 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 USP39Q53GS9 565 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 MCPH1Q8NEM0 835 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 SPATA33Q96N06 139 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 C11orf70Q9BRQ4 267 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PLEKHA5Q9HAU0 1116 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 EXOSC4Q9NPD3 245 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 DNAJC12Q9UKB3 198 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 ATP1A1P05023 1023 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 MMEP08473 750 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 NUP62P37198 522 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 CSE1LP55060 971 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 CUL3Q13618 768 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 GJC2Q5T442 439 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PID1Q7Z2X4 250 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 AGBL1Q96MI9 1066 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 ASCC2Q9H1I8 757 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 C2orf40Q9H1Z8 148 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 THAP9Q9H5L6 903 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PPP6R2O75170 966 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PLCG1P19174 1290 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 BCAR1P56945 870 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 INPP5AQ14642 412 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 VN1R5Q7Z5H4 357 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 GRAMD1CQ8IYS0 662 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 EXD1Q8NHP7 514 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 DYNLL2Q96FJ2 89 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 DIS3Q9Y2L1 958 aaKnown RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 SNX24Q9Y343 169 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 TEX14Q8IWB6 1497 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PDE8BO95263 885 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 ASNSP08243 561 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PDHA1P08559 390 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 MZF1P28698 734 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 CDC25AP30304 524 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 EIF4A1P60842 406 aaKnown RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 CCDC15Q0P6D6 951 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 ALKBH5Q6P6C2 394 aaKnown RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 NT5DC4Q86YG4 428 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 ARL8AQ96BM9 186 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 DIABLOQ9NR28 239 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 NOP53Q9NZM5 478 aaKnown RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PKD2L2Q9NZM6 624 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 RWDD2AQ9UIY3 292 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 SATB2Q9UPW6 733 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 TOP2BQ02880 1626 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 EIF3DO15371 548 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 TEX28O15482 410 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 CHGBP05060 677 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 ARHGAP17Q68EM7 881 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 IL31Q6EBC2 164 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 RCSD1Q6JBY9 416 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 LUZP2Q86TE4 346 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 TNPO2O14787 897 aaKnown RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 C21orf2O43822 256 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 RASSF9O75901 435 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 FCER1AP12319 257 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 IYDQ6PHW0 289 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PPP4R3CPQ6ZMV5 832 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PLAAQ9Y263 795 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 SLC30A1Q9Y6M5 507 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PRR23AA6NEV1 266 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 ARFIP2P53365 341 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 PMS2P54278 862 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 NR1H3Q13133 447 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 FAM83BQ5T0W9 1011 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 FAM102AQ5T9C2 384 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-201ENST00000358694 FAM162AQ96A26 154 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
CTNND1-201ENST00000358694 RNF123Q5XPI4 1314 aa9.37□□□□□ -0.91
CTNND1-201ENST00000358694 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms