RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 RBM12Q9NTZ6 932 aaKnown RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 MAFFQ9ULX9 164 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 MAD1L1Q9Y6D9 718 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 DUSP10Q9Y6W6 482 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 BICDL2A1A5D9 508 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 PABPN1LA6NDY0 278 aaKnown RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 HSD17B3P37058 310 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 ACADSBP45954 432 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 RASSF2P50749 326 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 NOP14P78316 857 aaKnown RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 PAPD7Q5XG87 772 aaKnown RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 NFRKBQ6P4R8 1299 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 IZUMO2Q6UXV1 221 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 USP43Q70EL4 1123 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 UTP4Q969X6 686 aaKnown RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 AIFM3Q96NN9 605 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 TSKSQ9UJT2 592 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 RABGAP1Q9Y3P9 1069 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 TOPAZ1Q8N9V7 1692 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 NBPF26B4DH59 902 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 GABBR2O75899 941 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 NDUFA10O95299 355 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 PABPC4LP0CB38 370 aaKnown RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 ADSLP30566 484 aaPredicted RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 BCAP31P51572 246 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF844Q08AG5 666 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 TBC1D10BQ4KMP7 808 aaPredicted RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 PIGWQ7Z7B1 504 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 ANKLE2Q86XL3 938 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 NUTM2AQ8IVF1 878 aaPredicted RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 GALNT4Q8N4A0 578 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 XAGE3Q8WTP9 111 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 KRT12Q99456 494 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 KRT82Q9NSB4 513 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 KLHL14Q9P2G3 628 aa9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.51□□□□□ -0.89
RBFOX1-203ENST00000355637 PIK3C2AO00443 1686 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 NALCNQ8IZF0 1738 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 YEATS4O95619 227 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 PFKFB1P16118 471 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 GNA11P29992 359 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 NECTIN1Q15223 517 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 TGFBIQ15582 683 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 Q6ZNX1 250 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 COPS6Q7L5N1 327 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 NUP93Q8N1F7 819 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 CDC26Q8NHZ8 85 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 RAB3IL1Q8TBN0 382 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 UROC1Q96N76 676 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 INPP4AQ96PE3 977 aaPredicted RBP9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 INO80BQ9C086 356 aaPredicted RBP9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 KLHL4Q9C0H6 718 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 EHMT1Q9H9B1 1298 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 TIMMDC1Q9NPL8 285 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 GPR108Q9NPR9 543 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 ANKARQ7Z5J8 1434 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 SNX3O60493 162 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 COBLO75128 1261 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 CDC27P30260 824 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 STT3AP46977 705 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 COX10Q12887 443 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 ANKRD1Q15327 319 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 KCNJ8Q15842 424 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF423Q2M1K9 1284 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 CMPK2Q5EBM0 449 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 MAP3K21Q5TCX8 1036 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 PDXDC1Q6P996 788 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 TMC5Q6UXY8 1006 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 C3orf62Q6ZUJ4 267 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 CD302Q8IX05 232 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 MS4A14Q96JA4 679 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 TM6SF1Q9BZW5 370 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 PCDH12Q9NPG4 1184 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 HPS4Q9NQG7 708 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 PIH1D3Q9NQM4 214 aaKnown RBP9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 SACM1LQ9NTJ5 587 aa9.5□□□□□ -0.89
RBFOX1-203ENST00000355637 E9PBE3 544 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ARHGAP33O14559 1287 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 HSPA9P38646 679 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ENTPD1P49961 510 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 STAT2P52630 851 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 MRPS9P82933 396 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 CYP27A1Q02318 531 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 WDR72Q3MJ13 1102 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 OTUD7BQ6GQQ9 843 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 USP37Q86T82 979 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 TTC5Q8N0Z6 440 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 BBS5Q8N3I7 341 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 NRG4Q8WWG1 115 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 RNF41Q9H4P4 317 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 CNOT10Q9H9A5 744 aaKnown RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ZNF287Q9HBT7 754 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 ZFYVE28Q9HCC9 887 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 POLMQ9NP87 494 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 TXLNGQ9NUQ3 528 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 GMIPQ9P107 970 aa9.49□□□□□ -0.89
RBFOX1-203ENST00000355637 UTP11Q9Y3A2 253 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms