RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL17A1-201ENST00000353479 NFIBO00712 420 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 NCK2O43639 380 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 ARP10275 920 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 TAL1P17542 331 aaPredicted RBP15.89■□□□□ 0.14
COL17A1-201ENST00000353479 ATP11AP98196 1134 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 TTC19Q6DKK2 380 aaPredicted RBP15.89■□□□□ 0.14
COL17A1-201ENST00000353479 EFCAB13Q8IY85 973 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 CAPS2Q9BXY5 557 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 PARD6BQ9BYG5 372 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 IL17RBQ9NRM6 502 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 SLC8A2Q9UPR5 921 aa15.89■□□□□ 0.14
COL17A1-201ENST00000353479 DIS3Q9Y2L1 958 aaKnown RBP15.89■□□□□ 0.14
COL17A1-201ENST00000353479 AGPAT1Q99943 283 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 KIFC3Q9BVG8 833 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 KLHL14Q9P2G3 628 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 TBK1Q9UHD2 729 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 TUBE1Q9UJT0 475 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 ADM5C9JUS6 153 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 LCP1P13796 627 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 RGS2P41220 211 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 RBP5P82980 135 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 TFDP2Q14188 446 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 C10orf67Q8IYJ2 551 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 GPC2Q8N158 579 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 FAF2Q96CS3 445 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 KRT10P13645 584 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 NCOA4Q13772 614 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 TRIM72Q6ZMU5 477 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 RASGRP2Q7LDG7 609 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 MCUQ8NE86 351 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 FAM71BQ8TC56 605 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 LRRC8CQ8TDW0 803 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 TNIP3Q96KP6 325 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 CFAP57Q96MR6 1250 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 FMO2Q99518 471 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 IP6K2Q9UHH9 426 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 ADGRG1Q9Y653 693 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 IFNAR2P48551 515 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 LRRC31Q6UY01 552 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 RDM1Q8NG50 284 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 UBN1Q9NPG3 1134 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 APEX2Q9UBZ4 518 aa15.89■□□□□ 0.13
COL17A1-201ENST00000353479 IGSF9BQ9UPX0 1349 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 PIK3R2O00459 728 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 UPP2O95045 317 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 MOCS2O96007 188 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 FBXO16Q8IX29 292 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 DCLK2Q8N568 766 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 PPFIBP2Q8ND30 876 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 SREBF1P36956 1147 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 SLMAPQ14BN4 828 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 PDIK1LQ8N165 341 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 GLIS2Q9BZE0 524 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 MROH8Q9H579 483 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 MAP3K20Q9NYL2 800 aaKnown RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 CPA4Q9UI42 421 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 LCMT1Q9UIC8 334 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 PITPNM2Q9BZ72 1349 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 MYBL1P10243 752 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 ZFPM1Q8IX07 1006 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 APPL2Q8NEU8 664 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 PGBD4Q96DM1 585 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 TRIM56Q9BRZ2 755 aaKnown RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 CYP26B1Q9NR63 512 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 KLHL8Q9P2G9 620 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 CCDC188H7C350 402 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 S100BP04271 92 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 GCLCP48506 637 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 EDRF1Q3B7T1 1238 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 PKNOX2Q96KN3 472 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 RUSC1Q9BVN2 902 aa15.88■□□□□ 0.13
COL17A1-201ENST00000353479 PACSIN2Q9UNF0 486 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-201ENST00000353479 A0A1B0GTH6 734 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 EIF3DO15371 548 aaKnown RBP eCLIP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 PSMD6Q15008 389 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 SYT2Q8N9I0 419 aaPredicted RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 MED24O75448 989 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 GRB10Q13322 594 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 NFRKBQ6P4R8 1299 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 RIOX1Q9H6W3 641 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 FZD1Q9UP38 647 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 GDAP1Q8TB36 358 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 NFU1Q9UMS0 254 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 SIGLEC1Q9BZZ2 1709 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 NLRP11P59045 1033 aaKnown RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 GABPB1Q06547 395 aaPredicted RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 PYROXD1Q8WU10 500 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 HDAC11Q96DB2 347 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 FHDC1Q9C0D6 1143 aaPredicted RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 INTS9Q9NV88 658 aaKnown RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 SNX24Q9Y343 169 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.87■□□□□ 0.13
COL17A1-201ENST00000353479 MYOM1P52179 1685 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 RRN3P2A6NIE6 340 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 MTF1Q14872 753 aa15.87■□□□□ 0.13
COL17A1-201ENST00000353479 IQCB1Q15051 598 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms