RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PHKA1P46020 1223 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CTTNQ14247 550 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PTK2BQ14289 1009 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 TAF1DQ9H5J8 278 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PSD3Q9NYI0 1048 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ALDH18A1P54886 795 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 NUP85Q9BW27 656 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ABCB11O95342 1321 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 RNF123Q5XPI4 1314 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 MYL3P08590 195 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CCND1P24385 295 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 KHDRBS2Q5VWX1 349 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ZNF467Q7Z7K2 595 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ARHGEF25Q86VW2 580 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 DDX42Q86XP3 938 aaKnown RBP eCLIP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 RNF135Q8IUD6 432 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 STX19Q8N4C7 294 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 AFG1LQ8WV93 481 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 SH2B2O14492 632 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 HSPA1AP0DMV8 641 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 HSPA1BP0DMV9 641 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PCP11498 1178 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 KLC1Q07866 573 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 DMC1Q14565 340 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 OLFML2BQ68BL8 750 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 RFWD2Q8NHY2 731 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PCDHB6Q9Y5E3 794 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ZNF839A8K0R7 811 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ERVV-2B6SEH9 535 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ATP1A3P13637 1013 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 S100A5P33763 92 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 MXI1P50539 228 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CCNA1P78396 465 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PDIA2Q13087 525 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CNGA3Q16281 694 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 BZW1Q7L1Q6 419 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CYGBQ8WWM9 190 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ASCC2Q9H1I8 757 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PLEKHG2Q9H7P9 1386 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 NGRNQ9NPE2 291 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 SEMA3EO15041 775 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CD2BP2O95400 341 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ARFIP2P53365 341 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ALKBH5Q6P6C2 394 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 LUZP2Q86TE4 346 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 EPS8L2Q9H6S3 715 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 KLC4Q9NSK0 619 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PRPF3O43395 683 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 OSBPP22059 807 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 STXBP2Q15833 593 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PLEKHM3Q6ZWE6 761 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 DHX40Q8IX18 779 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 NDUFAF2Q8N183 169 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ULK4Q96C45 1275 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 STOML2Q9UJZ1 356 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 SNX24Q9Y343 169 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 TRIM49BA6NDI0 452 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 SFI1A8K8P3 1242 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 BMP3P12645 472 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 HIF1AQ16665 826 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 RARS2Q5T160 578 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 NLRP14Q86W24 1093 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 SCG3Q8WXD2 468 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 EGFL8Q99944 293 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CCDC28BQ9BUN5 200 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 GRID2IPA4D2P6 1211 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 NME3Q13232 169 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 TJAP1Q5JTD0 557 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 LRRC31Q6UY01 552 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 BTN2A1Q7KYR7 527 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 RSPH1Q8WYR4 309 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ASPSCR1Q9BZE9 553 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ATP7BP35670 1465 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PTCH1Q13635 1447 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CCDC188H7C350 402 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PEX3P56589 373 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 DSTYKQ6XUX3 929 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 SPON1Q9HCB6 807 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 TRAF3IP3Q9Y228 551 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 NEMP1O14524 444 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 JAK3P52333 1124 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PURAQ00577 322 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ZNF211Q13398 564 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ARID5BQ14865 1188 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 BTNL9Q6UXG8 535 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 PUS3Q9BZE2 481 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 ETNK1Q9HBU6 452 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CYP26B1Q9NR63 512 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 CNOT8Q9UFF9 292 aaKnown RBP5.89□□□□□ -1.47
CPSF2-201ENST00000298875 USP17L3A6NCW0 530 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 USP17L4A6NCW7 530 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 PIK3R2O00459 728 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 KCNQ3O43525 872 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 GPR162Q16538 588 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 CCDC142Q17RM4 750 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 ZNF699Q32M78 642 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 USP17L1Q7RTZ2 530 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 RGL1Q9NZL6 768 aa5.88□□□□□ -1.47
CPSF2-201ENST00000298875 EHD2Q9NZN4 543 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms