RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Cdh15P33146 784 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Vsnl1P62761 191 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Smg5Q6ZPY2 1017 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ppp1r12bQ8BG95 976 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Gm16430A6X8J1 155 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Mark2Q05512 776 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ptgs2Q05769 604 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 PighQ5M9N4 188 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Tcf12Q61286 706 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 YwhabQ9CQV8 246 aaKnown RBP16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Crb1Q8VHS2 1405 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 En2P09066 324 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Sez6lQ6P1D5 963 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Olfr1415Q7TQS4 311 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Olfr1416Q8VGU4 312 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Apol8A2VDH7 339 aaKnown RBP16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 GpiP06745 558 aaKnown RBP16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 MybP06876 636 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 LeprP48356 1162 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rit2P70425 217 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Nudt18Q3U2V3 323 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Suds3Q8BR65 328 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pex19Q8VCI5 299 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rabgef1Q9JM13 491 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 A430078G23RikE9Q7Y4 484 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Zfp212G3X8R7 492 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Cacna2d1O08532 1103 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ago2Q8CJG0 860 aaKnown RBP16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ndufv1Q91YT0 464 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Top3aO70157 1003 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 P01734 135 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ccdc33Q3ULW6 985 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Spag6Q3V0U9 509 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 PhkbQ7TSH2 1085 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Tmem132cQ8CEF9 1099 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Tdrd1Q99MV1 1172 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Q9D937 123 aaKnown RBP16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Slc26a4Q9R155 780 aa16.72■□□□□ 0.27
Clcn3-203ENSMUST00000093490 6030498E09RikB1AX85 169 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Zfp846G3X996 541 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pla2g4bP0C871 782 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Lyve1Q8BHC0 318 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Gpr150Q8BL07 427 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Slc39a11Q8BWY7 342 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Nr3c2Q8VII8 978 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Trim16Q99PP9 556 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Tmem206Q9D771 350 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Sertad1Q9JL10 236 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Itga2bQ9QUM0 1033 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Tlr2Q9QUN7 784 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Stag2O35638 1231 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 StrnO55106 780 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 CnpP16330 420 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Spc25Q3UA16 226 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ece1Q4PZA2 769 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Cwf19l2Q8BG79 887 aaKnown RBP16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Frmd4aQ8BIE6 1020 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Apol9bQ8C7I4 310 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Apol9aQ8VDU3 310 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Tcp11x2A2AEI7 503 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Gbp10Q000W5 611 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Recql4Q75NR7 1216 aaKnown RBP16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Atxn2lQ7TQH0 1049 aaKnown RBP16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Arfip2Q8K221 341 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Scrn2Q8VCA8 425 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ndufb9Q9CQJ8 179 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Bcl9Q9D219 1425 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Krt10P02535 570 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Krt1P04104 637 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Q3KNL4 93 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 D630036H23RikQ3UQD6 204 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 4932411N23RikQ8C0S0 470 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Uba6Q8C7R4 1053 aa16.71■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Zfyve9A2A8R0 1397 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm3127E9Q9P5 263 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm3453K7N724 263 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Soat2O88908 525 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 PrkcbP68404 671 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 IqcmQ149I8 489 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gemin4Q6P6L6 1058 aaKnown RBP16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ush1gQ80T11 461 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gnl3Q8CI11 538 aaKnown RBP16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tasp1Q8R1G1 420 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 DtnaQ9D2N4 746 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rpap3Q9D706 660 aa16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gtf2ird1Q9JI57 1104 aaKnown RBP16.71■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Maml3D4QGC2 1135 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Alox15P39654 663 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cd86P42082 309 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cyth2P63034 400 aaKnown RBP16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cd180Q62192 661 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Zbtb41Q811F1 908 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ppp4r4Q8C0Y0 875 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Olfr395Q8VGR3 312 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Afg3l1Q920A7 789 aaKnown RBP16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cox16Q9CR63 106 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Slc1a1P51906 523 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ric8bQ80XE1 520 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Bpifb6Q8BU51 449 aa16.7■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Extl2Q9ES89 330 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms