RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Fgfr4Q03142 799 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Acot10Q32MW3 439 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Scarf1Q5ND28 820 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Uimc1Q5U5Q9 727 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Sema5bQ60519 1093 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Erlin2Q8BFZ9 340 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Adcy3Q8VHH7 1145 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Setd3Q91WC0 594 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 CactinQ9CS00 772 aaKnown RBP7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Lonp2Q9DBN5 852 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Wnt8bQ9WUD6 350 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Slc23a4A0A0J9YUX7 615 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gimap9G3X987 291 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Nsun7Q14AW5 724 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Zbtb5Q7TQG0 670 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 MylipQ8BM54 445 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Snx17Q8BVL3 470 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Elmo3Q8BYZ7 720 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Traf3ip3Q8C0G2 513 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 4921504E06RikQ8CET2 560 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ushbp1Q8R370 680 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Atp2a1Q8R429 994 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 PccaQ91ZA3 724 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Spred2Q924S7 410 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Castor1Q9CWQ8 331 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Foxe3Q9QY14 288 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 GsdmeQ9Z2D3 512 aa7.46□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ccdc152E9PX14 254 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tmem199Q5SYH2 208 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Aggf1Q7TN31 711 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gtf2a2Q80ZM7 109 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 NelfbQ8C4Y3 580 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Pls3Q99K51 630 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Themis3Q9CU24 569 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Syt10Q9R0N4 523 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 DexiQ9WUQ7 95 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Map2k5Q9WVS7 448 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Fpr-rs4A4FUQ5 323 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccdc191J3QQ27 883 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Aimp1P31230 310 aaKnown RBP7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Kcnj6P48542 425 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Znf800Q0VEE6 662 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Anp32cQ64G17 123 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ctnna3Q65CL1 895 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccdc85bQ6PDY0 202 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rad9bQ6WBX7 403 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Sdccag8Q80UF4 717 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rnf168Q80XJ2 565 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Thnsl1Q8BH55 747 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ppfibp1Q8C8U0 969 aaKnown RBP7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tada2aQ8CHV6 443 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rbm41Q8JZV4 413 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Pop1Q8K205 1045 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Mtmr14Q8VEL2 648 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Nol7Q9D7Z3 254 aaKnown RBP7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Psme4Q5SSW2 1843 aa7.46□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gm8882E9Q7E4 283 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gm3415J3QMS8 315 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Yme1l1O88967 715 aaKnown RBP7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Col2a1P28481 1487 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rpl13P47963 211 aaKnown RBP7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccr5P51682 354 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 MafP54843 370 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 NcanP55066 1268 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Defb25Q30KN8 71 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Plekha7Q3UIL6 1118 aaKnown RBP7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 P3h1Q3V1T4 739 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 PtprcapQ64697 197 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccdc57Q6PHN1 1016 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccdc17Q8CE13 565 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ago2Q8CJG0 860 aaKnown RBP7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rab3il1Q8VDV3 383 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Pcdha12Q91Y18 950 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ube2sQ921J4 223 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ndufaf7Q9CWG8 436 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Mms19Q9D071 1031 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gm3404Q9D506 307 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Slc34a2Q9DBP0 697 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Phtf1Q9QZ09 761 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 AmfrQ9R049 643 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Axin1O35625 863 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ap1b1O35643 943 aaKnown RBP7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tnfaip1O70479 316 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Echdc2Q3TLP5 296 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 UrgcpQ5NCI0 926 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Armcx2Q6A058 784 aaKnown RBP7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Clec16aQ80U30 1036 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tcaf1Q8BNE1 924 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ccdc15Q8C9M2 810 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Calcoco1Q8CGU1 691 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 SncbQ91ZZ3 133 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Spdl1Q923A2 608 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 PpihQ9D868 188 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cfap45Q9D9U9 551 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cnga3Q9JJZ8 631 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Fbxo17Q9QZM8 286 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Uchl5Q9WUP7 329 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Diaph1O08808 1255 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cd68P31996 326 aa7.45□□□□□ -1.22
Bdnf-201ENSMUST00000053317 DmwdQ08274 665 aa7.45□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms