RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Nr2c1Q505F1 590 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 E4f1Q8CCE9 783 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cdk5rap3Q99LM2 503 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Q9D9D9 101 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cpsf3Q9QXK7 684 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cacna1cQ01815 2139 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Klrk1O54709 232 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 ArP19091 899 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Zc3h18Q0P678 948 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Slc9a2Q3ZAS0 814 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 NostrinQ6WKZ7 506 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Sh3tc2Q80VA5 1289 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Agap1Q8BXK8 857 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 NemfQ8CCP0 1064 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ccdc137Q8R0K4 290 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cgref1Q8R1U2 281 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 LxnP70202 222 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Szrd1Q6NXN1 152 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 TdrkhQ80VL1 560 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Angel2Q8K1C0 544 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Nsmce1Q9D720 266 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Klhl40Q9D783 621 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Atp6v1e1P50518 226 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 OtulinQ3UCV8 352 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Dpf2Q61103 391 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gm5622Q810Q0 167 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Snrnp27Q8K194 155 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ddx39bQ9Z1N5 428 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cul9Q80TT8 1865 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ahdc1Q6PAL7 1594 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 GclmO09172 274 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Exosc10P56960 887 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 RadilQ69Z89 1099 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Snx19Q6P4T1 997 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Acot5Q6Q2Z6 421 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 NonoQ99K48 473 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Eef1akmt2Q9D853 244 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Iqcf1Q9D9K8 182 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Taf1bP97358 586 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Pfdn6Q03958 127 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Heatr9Q5QNV8 569 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Nab2Q61127 525 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Dnph1Q80VJ3 173 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Phf20l1Q8CCJ9 1013 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Col23a1Q8K4G2 532 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Rilpl1Q9JJC6 406 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tmem232Q5K6N0 675 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Sdf4Q61112 361 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tas2r134Q7TQB0 298 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Siglec10Q80ZE3 688 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gprc5cQ8K3J9 440 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tbc1d19Q8VDV7 526 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Myo1hQ9D6A1 958 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 ErmapQ9JLN5 566 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ttc41Q692V3 1318 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 A630010A05RikA9C473 232 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Wdr36Q3TAQ9 899 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 PodnQ7TQ62 611 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Thnsl1Q8BH55 747 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Sugt1Q9CX34 336 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 InhbaQ04998 424 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Nuak1Q641K5 658 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Nfkbil1O88995 381 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Hoxc10P31257 342 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Hspa8P63017 646 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Smcr8Q3UMB5 935 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Lrig2Q52KR2 1054 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Polr2bQ8CFI7 1174 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Smtnl2Q8CI12 456 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Them5Q9CQJ0 248 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Trpc4Q9QUQ5 974 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gabbr1Q9WV18 960 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Sept5Q9Z2Q6 369 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Chd3B1AR17 2055 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Serpinb3aG3X9V8 387 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 NfibP97863 570 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gjd4Q8BSD4 364 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Plekhg6Q8R0J1 787 aa9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Rrp1bQ91YK2 724 aaKnown RBP9.32□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cacna2d1O08532 1103 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Scamp3O35609 349 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Csf1rP09581 977 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 PrkceP16054 737 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cbx2P30658 519 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Arl4aP61213 200 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Meis3P97368 378 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ccdc138Q0VF22 680 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tgs1Q923W1 853 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 PapolaQ61183 739 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gps1Q99LD4 471 aaKnown RBP9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Mbd5B1AYB6 1498 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Vmn2r79E9Q067 851 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Nkx1-1G3UXB3 402 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gbp10Q000W5 611 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 D630036H23RikQ3UQD6 204 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tgfbrap1Q3UR70 860 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Oxsr1Q6P9R2 527 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ccz1Q8C1Y8 480 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 VcpkmtQ8C436 228 aa9.31□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cbwd1Q8VEH6 393 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms