RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Pde2aQ922S4 916 aa12.89□□□□□ -0.35
Rfx1-201ENSMUST00000005600 NptxrQ99J85 493 aa12.89□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tmed5Q9CXE7 229 aa12.89□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Zbed3Q9D0L1 228 aa12.89□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gpihbp1Q9D1N2 228 aa12.89□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Sdr42e1Q9D665 394 aa12.89□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rnf103Q9R1W3 683 aa12.89□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ace3D0G895 737 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Sh3gl3Q62421 347 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rusc1Q8BG26 893 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rccd1Q8BTU7 377 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Actl9Q8CG27 415 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ago4Q8CJF8 861 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 NcaldQ91X97 193 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Hsf2bpQ9D4G2 338 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 IdeQ9JHR7 1019 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 SmapQ9R0P4 181 aaKnown RBP12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gys1Q9Z1E4 738 aaKnown RBP12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Slfn8B1ARD8 910 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Slc3a2P10852 526 aaKnown RBP12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ces1cP23953 554 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Trim47Q8C0E3 641 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Fgfr1op2Q9CRA9 253 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gtf3c6Q9D8P7 227 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gpatch1Q9DBM1 930 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Bpifb9bA2AJD1 591 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 DgkkE9Q7N4 1118 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cdk14O35495 469 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Aff1O88573 1216 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 KhsrpQ3U0V1 748 aaKnown RBP12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Klra6Q60653 266 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tm4sf1Q64302 202 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Bpifb9aQ80XI7 591 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Zfp449Q8CB76 518 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 JmyQ9QXM1 983 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Adam22Q9R1V6 904 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Mtmr2Q9Z2D1 643 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rfx8D3YU81 596 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 CopeO89079 308 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Pik3r1P26450 724 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Lrrn4P59383 733 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Bpifb5Q3UQ05 490 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cnga4Q3UW12 575 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Dlg4Q62108 724 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 WlsQ6DID7 541 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Plcg2Q8CIH5 1265 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 MesdQ9ERE7 224 aa12.88□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gbp8Q2V6D6 525 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Znf354cQ571J5 560 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Sec23ipQ6NZC7 998 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 SnphQ80U23 495 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 AgpsQ8C0I1 645 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Acat1Q8QZT1 424 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Fkbp6Q91XW8 327 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Pcdhb3Q91XZ7 784 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Serpina1aP07758 413 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cyp2b9P12790 491 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Serpina1cQ00896 412 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Serpina1dQ00897 413 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rcn1Q05186 325 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Edem3Q2HXL6 931 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Fam81aQ3UXZ6 364 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ccdc160Q3UYG1 323 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ano5Q75UR0 904 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Kat5Q8CHK4 513 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Slc51aQ8R000 340 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Atxn7Q8R4I1 867 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Bag2Q91YN9 210 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Asb11Q9CQ31 323 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Dgcr8Q9EQM6 773 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ifi202Q9R002 445 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Noc2lQ9WV70 747 aaKnown RBP12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Mmrn2A6H6E2 943 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Pde8aO88502 823 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Zfp957Q3UT76 567 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gucy2fQ5SDA5 1108 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Trim21Q62191 470 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Zswim5Q80TC6 1188 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Dclre1bQ8C7W7 541 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Nemp2Q8CB65 421 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cnot8Q9D8X5 292 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Prkab1Q9R078 270 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tsc2Q61037 1814 aa12.87□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Zfp831A2ADM8 1628 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Sstr3P30935 428 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Scp2P32020 547 aaKnown RBP12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 CrkQ64010 304 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tmem132dQ76HP3 1097 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tmc8Q7TN58 722 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Fam20aQ8CID3 541 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Bst2Q8R2Q8 172 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Atp2a1Q8R429 994 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Slc25a38Q91XD8 326 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 CalcbQ99MP3 130 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Setd6Q9CWY3 473 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cpne8Q9DC53 577 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Klrc2Q9WTJ9 238 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 FscbA1EGX6 1074 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Pex5O09012 639 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ppp3caP63328 521 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms