RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C RPL5P26321 297 aaKnown RBP2.45□□□□□ -2.02
CUP9YPL177C RPL16BP26785 198 aaKnown RBP2.45□□□□□ -2.02
CUP9YPL177C SWD2P36104 329 aaPredicted RBP2.45□□□□□ -2.02
CUP9YPL177C ASP1P38986 381 aaPredicted RBP2.45□□□□□ -2.02
CUP9YPL177C GDS1P41913 522 aa2.45□□□□□ -2.02
CUP9YPL177C UBC13P52490 153 aa2.45□□□□□ -2.02
CUP9YPL177C ACT1P60010 375 aaKnown RBP2.45□□□□□ -2.02
CUP9YPL177C VIK1Q12045 647 aa2.45□□□□□ -2.02
CUP9YPL177C IZH4Q99393 312 aa2.45□□□□□ -2.02
CUP9YPL177C YCR025CP25352 136 aa2.44□□□□□ -2.02
CUP9YPL177C EDC2P40023 145 aaPredicted RBP2.44□□□□□ -2.02
CUP9YPL177C LOH1P47055 219 aa2.44□□□□□ -2.02
CUP9YPL177C SWC4P53201 476 aa2.44□□□□□ -2.02
CUP9YPL177C TAZ1Q06510 381 aa2.44□□□□□ -2.02
CUP9YPL177C YPL264CQ08980 353 aa2.44□□□□□ -2.02
CUP9YPL177C YPL278CQ08990 100 aa2.44□□□□□ -2.02
CUP9YPL177C SIA1Q12212 622 aa2.44□□□□□ -2.02
CUP9YPL177C ERP3Q12403 225 aa2.44□□□□□ -2.02
CUP9YPL177C RPS23AP0CX29 145 aaKnown RBP2.43□□□□□ -2.02
CUP9YPL177C RPS23BP0CX30 145 aa2.43□□□□□ -2.02
CUP9YPL177C CDC42P19073 191 aa2.43□□□□□ -2.02
CUP9YPL177C CDC13P32797 924 aaKnown RBP2.43□□□□□ -2.02
CUP9YPL177C IMP3P32899 183 aaPredicted RBP2.43□□□□□ -2.02
CUP9YPL177C TPO5P36029 618 aa2.43□□□□□ -2.02
CUP9YPL177C YIL012WP40551 113 aa2.43□□□□□ -2.02
CUP9YPL177C COX16P47081 118 aa2.43□□□□□ -2.02
CUP9YPL177C PNC1P53184 216 aaKnown RBP2.43□□□□□ -2.02
CUP9YPL177C GTO3Q04806 366 aa2.43□□□□□ -2.02
CUP9YPL177C YDR222WQ04925 415 aa2.43□□□□□ -2.02
CUP9YPL177C UGA1P17649 471 aa2.42□□□□□ -2.02
CUP9YPL177C GPI12P23797 304 aa2.42□□□□□ -2.02
CUP9YPL177C ARO4P32449 370 aaKnown RBP2.42□□□□□ -2.02
CUP9YPL177C IME2P32581 645 aa2.42□□□□□ -2.02
CUP9YPL177C RPC25P35718 212 aa2.42□□□□□ -2.02
CUP9YPL177C AIM29P36154 155 aa2.42□□□□□ -2.02
CUP9YPL177C VTI1Q04338 217 aa2.42□□□□□ -2.02
CUP9YPL177C YAL063C-AQ3E791 96 aa2.42□□□□□ -2.02
CUP9YPL177C CSM1P25651 190 aa2.41□□□□□ -2.02
CUP9YPL177C MRPL6P32904 214 aa2.41□□□□□ -2.02
CUP9YPL177C VAB2P40003 282 aa2.41□□□□□ -2.02
CUP9YPL177C LOC1P43586 204 aaPredicted RBP2.41□□□□□ -2.02
CUP9YPL177C GCD14P46959 383 aaPredicted RBP2.41□□□□□ -2.02
CUP9YPL177C SPO19Q03029 223 aa2.41□□□□□ -2.02
CUP9YPL177C ECM18Q04623 453 aa2.41□□□□□ -2.02
CUP9YPL177C ARC18Q05933 178 aaKnown RBP2.41□□□□□ -2.02
CUP9YPL177C PEX30Q06169 523 aa2.41□□□□□ -2.02
CUP9YPL177C ASR1Q06834 288 aa2.41□□□□□ -2.02
CUP9YPL177C RRP42Q12277 265 aaPredicted RBP2.41□□□□□ -2.02
CUP9YPL177C YPR064WQ12492 139 aa2.41□□□□□ -2.02
CUP9YPL177C PRE7P23724 241 aaKnown RBP2.4□□□□□ -2.03
CUP9YPL177C YKL063CP35725 167 aa2.4□□□□□ -2.03
CUP9YPL177C MRPL40P36534 297 aa2.4□□□□□ -2.03
CUP9YPL177C YGL185CP53100 379 aa2.4□□□□□ -2.03
CUP9YPL177C RPN14P53196 417 aa2.4□□□□□ -2.03
CUP9YPL177C YNL040WP53960 456 aaPredicted RBP2.4□□□□□ -2.03
CUP9YPL177C DXO1Q06349 442 aa2.4□□□□□ -2.03
CUP9YPL177C HPR1P17629 752 aaKnown RBP2.39□□□□□ -2.03
CUP9YPL177C DBP3P20447 523 aaKnown RBP2.39□□□□□ -2.03
CUP9YPL177C IFM1P25038 676 aa2.39□□□□□ -2.03
CUP9YPL177C IMP1P28627 190 aa2.39□□□□□ -2.03
CUP9YPL177C RPC37P36121 282 aa2.39□□□□□ -2.03
CUP9YPL177C ECM14P38836 430 aa2.39□□□□□ -2.03
CUP9YPL177C YFL064CP43540 174 aa2.39□□□□□ -2.03
CUP9YPL177C UFD1P53044 361 aa2.39□□□□□ -2.03
CUP9YPL177C POM33Q12164 279 aa2.39□□□□□ -2.03
CUP9YPL177C IES3Q12345 250 aa2.39□□□□□ -2.03
CUP9YPL177C MRPL23Q12487 163 aaPredicted RBP2.39□□□□□ -2.03
CUP9YPL177C ATP6P00854 259 aa2.38□□□□□ -2.03
CUP9YPL177C DAL81P21657 970 aa2.38□□□□□ -2.03
CUP9YPL177C VPH2P32341 215 aa2.38□□□□□ -2.03
CUP9YPL177C CSE1P33307 960 aa2.38□□□□□ -2.03
CUP9YPL177C MRPL3P36516 390 aa2.38□□□□□ -2.03
CUP9YPL177C MBA1P38300 278 aa2.38□□□□□ -2.03
CUP9YPL177C SMC2P38989 1170 aaKnown RBP2.38□□□□□ -2.03
CUP9YPL177C SPO73P40031 143 aa2.38□□□□□ -2.03
CUP9YPL177C PCL7P40186 285 aa2.38□□□□□ -2.03
CUP9YPL177C AGP3P43548 558 aa2.38□□□□□ -2.03
CUP9YPL177C YFR045WP43617 309 aa2.38□□□□□ -2.03
CUP9YPL177C GTO1P48239 356 aa2.38□□□□□ -2.03
CUP9YPL177C PRP24P49960 444 aaKnown RBP2.38□□□□□ -2.03
CUP9YPL177C YPL077CQ02831 240 aa2.38□□□□□ -2.03
CUP9YPL177C YPL113CQ02961 396 aa2.38□□□□□ -2.03
CUP9YPL177C SGT2Q12118 346 aaKnown RBP2.38□□□□□ -2.03
CUP9YPL177C YOR114WQ12219 294 aa2.38□□□□□ -2.03
CUP9YPL177C GAL7P08431 366 aa2.37□□□□□ -2.03
CUP9YPL177C DAL5P15365 543 aa2.37□□□□□ -2.03
CUP9YPL177C MEK1P24719 497 aaPredicted RBP2.37□□□□□ -2.03
CUP9YPL177C RPS0AP32905 252 aaKnown RBP2.37□□□□□ -2.03
CUP9YPL177C SPT4P32914 102 aaPredicted RBP2.37□□□□□ -2.03
CUP9YPL177C YBL081WP38180 368 aaKnown RBP2.37□□□□□ -2.03
CUP9YPL177C HIS2P38635 335 aa2.37□□□□□ -2.03
CUP9YPL177C RRF1P38771 230 aa2.37□□□□□ -2.03
CUP9YPL177C VPS45P38932 577 aa2.37□□□□□ -2.03
CUP9YPL177C KRE29P40026 464 aa2.37□□□□□ -2.03
CUP9YPL177C SHQ1P40486 507 aaPredicted RBP2.37□□□□□ -2.03
CUP9YPL177C AVT7P40501 490 aa2.37□□□□□ -2.03
CUP9YPL177C ECO1P43605 281 aa2.37□□□□□ -2.03
CUP9YPL177C MPP10P47083 593 aaKnown RBP2.37□□□□□ -2.03
CUP9YPL177C YPT32P51996 222 aaKnown RBP2.37□□□□□ -2.03
CUP9YPL177C ARP5P53946 755 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms