RNA–Protein interactions for RNA: YOR275C

RIM20, Transcript of Protein involved in proteolytic activation of Rim101p, yeast

Gene RIM20, Length 1,986 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM20	YOR275C	SWC5	P38326	303 aa		0.93	□□□□□ -2.26
RIM20	YOR275C	ASP1	P38986	381 aa	Predicted RBP	0.93	□□□□□ -2.26
RIM20	YOR275C	CAB5	Q03941	241 aa		0.93	□□□□□ -2.26
RIM20	YOR275C	KAP95	Q06142	861 aa	Known RBP	0.93	□□□□□ -2.26
RIM20	YOR275C	CDD1	Q06549	142 aa		0.93	□□□□□ -2.26
RIM20	YOR275C	VAC14	Q06708	880 aa		0.93	□□□□□ -2.26
RIM20	YOR275C	TFC7	Q12415	435 aa		0.93	□□□□□ -2.26
RIM20	YOR275C	MRPL23	Q12487	163 aa	Predicted RBP	0.93	□□□□□ -2.26
RIM20	YOR275C	RPL6B	P05739	176 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	RPC40	P07703	335 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	FRS2	P15625	503 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	THR4	P16120	514 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	PRE7	P23724	241 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	CIN8	P27895	1000 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	EHD3	P28817	500 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	ITR2	P30606	609 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	KTI12	P34253	313 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	TPO5	P36029	618 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	YBR062C	P38239	180 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	FET3	P38993	636 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	BIO4	P53630	237 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
RIM20	YOR275C	RPL6A	Q02326	176 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	SPO19	Q03029	223 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	YDR114C	Q04597	100 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	YMR310C	Q04867	317 aa	Predicted RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	FEX1	Q08913	375 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	FEX2	Q08991	375 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	TY3A-G	Q12173	290 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	YDR262W	Q12331	272 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	TY3A-I	Q99219	290 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	STF1	P01098	86 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	CDC37	P06101	506 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	ARG80	P07249	177 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	RPL18A	P0CX49	186 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	RPL18B	P0CX50	186 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	POL30	P15873	258 aa	Known RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	IMP3	P32899	183 aa	Predicted RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	YKL187C	P34231	750 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	MYO3	P36006	1272 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	ATG12	P38316	186 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	VPS45	P38932	577 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	BUD13	P46947	266 aa	Predicted RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	GTO1	P48239	356 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	HCH1	P53834	153 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	YNL040W	P53960	456 aa	Predicted RBP	0.92	□□□□□ -2.26
RIM20	YOR275C	CSI1	Q04368	295 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	ERV41	Q04651	352 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	YLL007C	Q07799	665 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	MRX4	Q12467	430 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	NBL1	Q3E7Y6	73 aa		0.92	□□□□□ -2.26
RIM20	YOR275C	RPP0	P05317	312 aa	Known RBP	0.91	□□□□□ -2.26
RIM20	YOR275C	UGA1	P17649	471 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	DAL80	P26343	269 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	ERG9	P29704	444 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	MED8	P38304	223 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	PRP39	P39682	629 aa	Known RBP	0.91	□□□□□ -2.26
RIM20	YOR275C	INA22	P40576	216 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	TIM21	P53220	239 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	LSB1	P53281	241 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	RRG8	Q06109	277 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	TRM10	Q12400	293 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	ERP3	Q12403	225 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	FMP16	Q12497	93 aa		0.91	□□□□□ -2.26
RIM20	YOR275C	KOG1	P38873	1557 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	COX2	P00410	251 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	RNR2	P09938	399 aa	Known RBP	0.9	□□□□□ -2.26
RIM20	YOR275C	CUP1-1	P0CX80	61 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	CUP1-2	P0CX81	61 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	GCD2	P12754	651 aa	Predicted RBP	0.9	□□□□□ -2.26
RIM20	YOR275C	GPI12	P23797	304 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	YCR025C	P25352	136 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	PET18	P25362	215 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	RSA4	P25382	515 aa	Known RBP	0.9	□□□□□ -2.26
RIM20	YOR275C	HMX1	P32339	317 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	YPC1	P38298	316 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	YGP1	P38616	354 aa	Known RBP	0.9	□□□□□ -2.26
RIM20	YOR275C	YMR134W	P40207	237 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	BTT1	P40314	149 aa	Predicted RBP	0.9	□□□□□ -2.26
RIM20	YOR275C	YAR1	P46683	200 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	MND1	P53102	219 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	YNR066C	P53752	436 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	RNH1	Q04740	348 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	YLR413W	Q06689	675 aa		0.9	□□□□□ -2.26
RIM20	YOR275C	SIN3	P22579	1536 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	GDS1	P41913	522 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	AGX1	P43567	385 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	YGL114W	P53134	725 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	OKP1	P53298	406 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	MNT4	P53745	580 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	COX20	Q04935	205 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	YLR297W	Q05899	129 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	ARV1	Q06541	321 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	MRX9	Q07349	420 aa	Known RBP	0.9	□□□□□ -2.27
RIM20	YOR275C	PFK27	Q12471	397 aa	Predicted RBP	0.9	□□□□□ -2.27
RIM20	YOR275C	YPL229W	Q99395	206 aa		0.9	□□□□□ -2.27
RIM20	YOR275C	MSF1	P08425	469 aa		0.89	□□□□□ -2.27
RIM20	YOR275C	GAL7	P08431	366 aa		0.89	□□□□□ -2.27
RIM20	YOR275C	YLL053C	P0CD98	152 aa		0.89	□□□□□ -2.27
RIM20	YOR275C	RPS5	P26783	225 aa	Known RBP	0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms