RNA–Protein interactions for RNA: YNR010W

CSE2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene CSE2, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSE2	YNR010W	SPO24	Q3E752	67 aa		0.49	□□□□□ -2.33
CSE2	YNR010W	STE3	P06783	470 aa		0.48	□□□□□ -2.33
CSE2	YNR010W	RDS1	P25611	832 aa		0.48	□□□□□ -2.33
CSE2	YNR010W	HMX1	P32339	317 aa		0.48	□□□□□ -2.33
CSE2	YNR010W	AIM29	P36154	155 aa		0.48	□□□□□ -2.33
CSE2	YNR010W	SOP4	P39543	234 aa	Predicted RBP	0.48	□□□□□ -2.33
CSE2	YNR010W	LSM4	P40070	187 aa	Known RBP	0.48	□□□□□ -2.33
CSE2	YNR010W	RSC1	P53236	928 aa		0.48	□□□□□ -2.33
CSE2	YNR010W	SLM2	P53955	656 aa		0.48	□□□□□ -2.33
CSE2	YNR010W	YMR310C	Q04867	317 aa	Predicted RBP	0.48	□□□□□ -2.33
CSE2	YNR010W	YPL278C	Q08990	100 aa		0.48	□□□□□ -2.33
CSE2	YNR010W	DCP1	Q12517	231 aa	Predicted RBP	0.48	□□□□□ -2.33
CSE2	YNR010W	RAD10	P06838	210 aa		0.47	□□□□□ -2.33
CSE2	YNR010W	TRM7	P38238	310 aa	Known RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.47	□□□□□ -2.33	not detected
CSE2	YNR010W	ALP1	P38971	573 aa		0.47	□□□□□ -2.33
CSE2	YNR010W	BTT1	P40314	149 aa	Predicted RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	YJR141W	P47172	347 aa	Predicted RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	YPT32	P51996	222 aa	Known RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	COS6	P53344	381 aa		0.47	□□□□□ -2.33
CSE2	YNR010W	BIO4	P53630	237 aa		0.47	□□□□□ -2.33
CSE2	YNR010W	YNL143C	P53908	130 aa		0.47	□□□□□ -2.33
CSE2	YNR010W	EBS1	Q03466	884 aa	Known RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	GRH1	Q04410	372 aa	Known RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	DTD1	Q07648	150 aa	Known RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	RTC5	Q12108	567 aa	Known RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	GLE1	Q12315	538 aa		0.47	□□□□□ -2.33
CSE2	YNR010W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.47	□□□□□ -2.33
CSE2	YNR010W	MEI5	P32489	222 aa		0.46	□□□□□ -2.34
CSE2	YNR010W	YPC1	P38298	316 aa		0.46	□□□□□ -2.34
CSE2	YNR010W	YDR089W	P38966	869 aa		0.46	□□□□□ -2.34
CSE2	YNR010W	GDI1	P39958	451 aa	Known RBP	0.46	□□□□□ -2.34
CSE2	YNR010W	SEC28	P40509	296 aa	Known RBP	0.46	□□□□□ -2.34
CSE2	YNR010W	YFL064C	P43540	174 aa		0.46	□□□□□ -2.34
CSE2	YNR010W	MND1	P53102	219 aa		0.46	□□□□□ -2.34
CSE2	YNR010W	SPO77	Q06134	477 aa		0.46	□□□□□ -2.34
CSE2	YNR010W	TOM40	P23644	387 aa	Known RBP	0.45	□□□□□ -2.34
CSE2	YNR010W	YCR102C	P25608	368 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	PUP2	P32379	260 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	CDC13	P32797	924 aa	Known RBP	0.45	□□□□□ -2.34
CSE2	YNR010W	MBA1	P38300	278 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	PRP39	P39682	629 aa	Known RBP	0.45	□□□□□ -2.34
CSE2	YNR010W	VAB2	P40003	282 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	TAF6	P53040	516 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	LIF1	P53150	421 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	RSM27	P53305	110 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	YLR446W	Q06204	433 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	VIK1	Q12045	647 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	NOT5	Q12514	560 aa	Predicted RBP	0.45	□□□□□ -2.34
CSE2	YNR010W	YBL112C	Q3E7Y4	105 aa		0.45	□□□□□ -2.34
CSE2	YNR010W	YLL053C	P0CD98	152 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	ERD1	P16151	362 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	YOR062C	P36025	268 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	TPO5	P36029	618 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	YKL162C	P36052	402 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	AVT7	P40501	490 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	PRP24	P49960	444 aa	Known RBP	0.44	□□□□□ -2.34
CSE2	YNR010W	VPS9	P54787	451 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	YPL039W	Q03080	316 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	TVP15	Q03860	143 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	ARC18	Q05933	178 aa	Known RBP	0.44	□□□□□ -2.34
CSE2	YNR010W	YDL144C	Q07589	356 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	EMC6	Q12431	108 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	LAG2	Q92325	660 aa		0.44	□□□□□ -2.34
CSE2	YNR010W	RPL6B	P05739	176 aa	Known RBP	0.43	□□□□□ -2.34
CSE2	YNR010W	POX1	P13711	748 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	MRPL3	P36516	390 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	YHR045W	P38775	560 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	SPL2	P38839	148 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	SUR2	P38992	349 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	AVT6	P40074	448 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	COG3	P40094	801 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	RPA34	P47006	233 aa	Predicted RBP	0.43	□□□□□ -2.34
CSE2	YNR010W	RPL6A	Q02326	176 aa	Known RBP	0.43	□□□□□ -2.34
CSE2	YNR010W	SNX41	Q04053	625 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	NNT1	Q05874	261 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	STE23	Q06010	1027 aa		0.43	□□□□□ -2.34
CSE2	YNR010W	TDH1	P00360	332 aa	Known RBP	0.42	□□□□□ -2.34
CSE2	YNR010W	RAD7	P06779	565 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	RBK1	P25332	333 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	ATG15	P25641	520 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	IMP1	P28627	190 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	IMP3	P32899	183 aa	Predicted RBP	0.42	□□□□□ -2.34
CSE2	YNR010W	MRPL6	P32904	214 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	MCH2	P36032	473 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	PES4	P39684	611 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	SWT21	P53873	357 aa	Predicted RBP	0.42	□□□□□ -2.34
CSE2	YNR010W	MRS2	Q01926	470 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	LOA1	Q06508	300 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	TAZ1	Q06510	381 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	FRE6	Q12473	712 aa		0.42	□□□□□ -2.34
CSE2	YNR010W	RAS2	P01120	322 aa	Known RBP	0.41	□□□□□ -2.34
CSE2	YNR010W	HSP82	P02829	709 aa	Known RBP	0.41	□□□□□ -2.34
CSE2	YNR010W	SHQ1	P40486	507 aa	Predicted RBP	0.41	□□□□□ -2.34
CSE2	YNR010W	MRPL49	P40858	161 aa	Predicted RBP	0.41	□□□□□ -2.34
CSE2	YNR010W	GDS1	P41913	522 aa		0.41	□□□□□ -2.34
CSE2	YNR010W	RPE1	P46969	238 aa		0.41	□□□□□ -2.34
CSE2	YNR010W	GON7	P46984	123 aa		0.41	□□□□□ -2.34
CSE2	YNR010W	UBC13	P52490	153 aa		0.41	□□□□□ -2.34
CSE2	YNR010W	INM2	Q05533	292 aa		0.41	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms