RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A LDB18Q07887 179 aa2.87□□□□□ -1.95
YSF3YNL138W-A IZH2Q12442 317 aa2.87□□□□□ -1.95
YSF3YNL138W-A PAR32Q12515 295 aaKnown RBP2.87□□□□□ -1.95
YSF3YNL138W-A EFG1Q3E705 233 aaKnown RBP2.87□□□□□ -1.95
YSF3YNL138W-A IZH4Q99393 312 aa2.87□□□□□ -1.95
YSF3YNL138W-A URA2P07259 2214 aaKnown RBP2.87□□□□□ -1.95
YSF3YNL138W-A CDC21P06785 304 aa2.86□□□□□ -1.95
YSF3YNL138W-A KRR1P25586 316 aaPredicted RBP2.86□□□□□ -1.95
YSF3YNL138W-A HXT1P32465 570 aa2.86□□□□□ -1.95
YSF3YNL138W-A DPH5P32469 300 aaPredicted RBP2.86□□□□□ -1.95
YSF3YNL138W-A PRS1P32895 427 aaKnown RBP2.86□□□□□ -1.95
YSF3YNL138W-A LTV1P34078 463 aa2.86□□□□□ -1.95
YSF3YNL138W-A FET3P38993 636 aa2.86□□□□□ -1.95
YSF3YNL138W-A COX14P39103 70 aa2.86□□□□□ -1.95
YSF3YNL138W-A GIM4P40005 111 aaKnown RBP2.86□□□□□ -1.95
YSF3YNL138W-A ENT5Q03769 411 aaKnown RBP2.86□□□□□ -1.95
YSF3YNL138W-A YMR027WQ04371 470 aa2.86□□□□□ -1.95
YSF3YNL138W-A CCW14O13547 238 aa2.85□□□□□ -1.95
YSF3YNL138W-A RNR2P09938 399 aaKnown RBP2.85□□□□□ -1.95
YSF3YNL138W-A PCL1P24867 279 aa2.85□□□□□ -1.95
YSF3YNL138W-A CHA1P25379 360 aaKnown RBP2.85□□□□□ -1.95
YSF3YNL138W-A MGM101P32787 269 aaKnown RBP2.85□□□□□ -1.95
YSF3YNL138W-A PRP18P33411 251 aaPredicted RBP2.85□□□□□ -1.95
YSF3YNL138W-A DTR1P38125 572 aa2.85□□□□□ -1.95
YSF3YNL138W-A SWC5P38326 303 aa2.85□□□□□ -1.95
YSF3YNL138W-A INM1P38710 295 aa2.85□□□□□ -1.95
YSF3YNL138W-A CAJ1P39101 391 aa2.85□□□□□ -1.95
YSF3YNL138W-A AIM10P39965 576 aaKnown RBP2.85□□□□□ -1.95
YSF3YNL138W-A COS1P53822 381 aa2.85□□□□□ -1.95
YSF3YNL138W-A MDM36Q06820 579 aa2.85□□□□□ -1.95
YSF3YNL138W-A MSA1Q08471 629 aa2.85□□□□□ -1.95
YSF3YNL138W-A RUP1Q12242 671 aa2.85□□□□□ -1.95
YSF3YNL138W-A SEY1Q99287 776 aa2.85□□□□□ -1.95
YSF3YNL138W-A SLH1P53327 1967 aaKnown RBP2.84□□□□□ -1.95
YSF3YNL138W-A MSI1P13712 422 aa2.84□□□□□ -1.95
YSF3YNL138W-A RPC25P35718 212 aa2.84□□□□□ -1.95
YSF3YNL138W-A YGP1P38616 354 aaKnown RBP2.84□□□□□ -1.95
YSF3YNL138W-A AIM18P38884 321 aa2.84□□□□□ -1.95
YSF3YNL138W-A MIG3P39943 394 aa2.84□□□□□ -1.95
YSF3YNL138W-A SEC28P40509 296 aaKnown RBP2.84□□□□□ -1.95
YSF3YNL138W-A LCB3P47013 409 aa2.84□□□□□ -1.95
YSF3YNL138W-A ROG1P53118 685 aa2.84□□□□□ -1.95
YSF3YNL138W-A NDE2Q07500 545 aa2.84□□□□□ -1.95
YSF3YNL138W-A YOR114WQ12219 294 aa2.84□□□□□ -1.95
YSF3YNL138W-A OPI3P05375 206 aa2.83□□□□□ -1.96
YSF3YNL138W-A PDE2P06776 526 aa2.83□□□□□ -1.96
YSF3YNL138W-A SSC1P0CS90 654 aaKnown RBP2.83□□□□□ -1.96
YSF3YNL138W-A NUP2P32499 720 aa2.83□□□□□ -1.96
YSF3YNL138W-A PRX1P34227 261 aaKnown RBP2.83□□□□□ -1.96
YSF3YNL138W-A LDB7P38210 180 aa2.83□□□□□ -1.96
YSF3YNL138W-A QDR3P38227 689 aa2.83□□□□□ -1.96
YSF3YNL138W-A UTP18P40362 594 aaPredicted RBP2.83□□□□□ -1.96
YSF3YNL138W-A EFM4P40516 257 aa2.83□□□□□ -1.96
YSF3YNL138W-A GAB1P41733 394 aa2.83□□□□□ -1.96
YSF3YNL138W-A ECO1P43605 281 aa2.83□□□□□ -1.96
YSF3YNL138W-A AIP1P46680 615 aaKnown RBP2.83□□□□□ -1.96
YSF3YNL138W-A TOS2P50078 622 aa2.83□□□□□ -1.96
YSF3YNL138W-A SEH1P53011 349 aaKnown RBP2.83□□□□□ -1.96
YSF3YNL138W-A HAL1Q01766 294 aa2.83□□□□□ -1.96
YSF3YNL138W-A TDA1Q03533 586 aa2.83□□□□□ -1.96
YSF3YNL138W-A RNH1Q04740 348 aa2.83□□□□□ -1.96
YSF3YNL138W-A YDR222WQ04925 415 aa2.83□□□□□ -1.96
YSF3YNL138W-A RIF2Q06208 395 aa2.83□□□□□ -1.96
YSF3YNL138W-A CUE5Q08412 411 aaKnown RBP2.83□□□□□ -1.96
YSF3YNL138W-A YGK3Q12222 375 aaPredicted RBP2.83□□□□□ -1.96
YSF3YNL138W-A RPN5Q12250 445 aaKnown RBP2.83□□□□□ -1.96
YSF3YNL138W-A RNH203Q12338 110 aa2.83□□□□□ -1.96
YSF3YNL138W-A SOD1P00445 154 aaKnown RBP2.82□□□□□ -1.96
YSF3YNL138W-A DBF2P22204 572 aa2.82□□□□□ -1.96
YSF3YNL138W-A TRX1P22217 103 aaKnown RBP2.82□□□□□ -1.96
YSF3YNL138W-A PHO91P27514 894 aa2.82□□□□□ -1.96
YSF3YNL138W-A IMP3P32899 183 aaPredicted RBP2.82□□□□□ -1.96
YSF3YNL138W-A PCH2P38126 564 aa2.82□□□□□ -1.96
YSF3YNL138W-A YHK8P38776 514 aa2.82□□□□□ -1.96
YSF3YNL138W-A EGT2P42835 1041 aa2.82□□□□□ -1.96
YSF3YNL138W-A YFR057WP43625 151 aa2.82□□□□□ -1.96
YSF3YNL138W-A PMT5P52867 743 aa2.82□□□□□ -1.96
YSF3YNL138W-A SPR6Q01684 191 aa2.82□□□□□ -1.96
YSF3YNL138W-A OSH6Q02201 448 aa2.82□□□□□ -1.96
YSF3YNL138W-A PRP3Q03338 469 aaPredicted RBP2.82□□□□□ -1.96
YSF3YNL138W-A TSA2Q04120 196 aa2.82□□□□□ -1.96
YSF3YNL138W-A EAF3Q12432 401 aa2.82□□□□□ -1.96
YSF3YNL138W-A FLO9P39712 1322 aa2.82□□□□□ -1.96
YSF3YNL138W-A ERG9P29704 444 aa2.81□□□□□ -1.96
YSF3YNL138W-A YEF1P32622 495 aa2.81□□□□□ -1.96
YSF3YNL138W-A RTC2P38279 296 aa2.81□□□□□ -1.96
YSF3YNL138W-A YHR045WP38775 560 aa2.81□□□□□ -1.96
YSF3YNL138W-A AIM24P47127 394 aa2.81□□□□□ -1.96
YSF3YNL138W-A STE24P47154 453 aa2.81□□□□□ -1.96
YSF3YNL138W-A BNS1P50084 137 aa2.81□□□□□ -1.96
YSF3YNL138W-A BIO3P50277 480 aa2.81□□□□□ -1.96
YSF3YNL138W-A MST27P53176 234 aa2.81□□□□□ -1.96
YSF3YNL138W-A YGR016WP53209 190 aa2.81□□□□□ -1.96
YSF3YNL138W-A CRH1P53301 507 aa2.81□□□□□ -1.96
YSF3YNL138W-A EOS1P53938 366 aa2.81□□□□□ -1.96
YSF3YNL138W-A YMR102CQ03177 834 aa2.81□□□□□ -1.96
YSF3YNL138W-A GAS2Q06135 555 aa2.81□□□□□ -1.96
YSF3YNL138W-A JID1Q12350 301 aa2.81□□□□□ -1.96
YSF3YNL138W-A GTT2Q12390 233 aa2.81□□□□□ -1.96
YSF3YNL138W-A GEP5Q12393 293 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms