RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	RSM10	Q03201	203 aa		11.15	□□□□□ -0.62
SIS1	YNL007C	MSS11	Q03825	758 aa		11.15	□□□□□ -0.62
SIS1	YNL007C	SNX41	Q04053	625 aa		11.15	□□□□□ -0.62
SIS1	YNL007C	RRP9	Q06506	573 aa	Known RBP	11.15	□□□□□ -0.62
SIS1	YNL007C	YPL199C	Q08954	240 aa		11.15	□□□□□ -0.62
SIS1	YNL007C	TIR4	Q12218	487 aa	Predicted RBP	11.15	□□□□□ -0.62
SIS1	YNL007C	SET6	Q12529	373 aa		11.15	□□□□□ -0.62
SIS1	YNL007C	PBS2	P08018	668 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	RPS18A	P0CX55	146 aa	Known RBP	11.14	□□□□□ -0.63
SIS1	YNL007C	RPS18B	P0CX56	146 aa	Predicted RBP	11.14	□□□□□ -0.63
SIS1	YNL007C	DOA4	P32571	926 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	VPS17	P32913	551 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	11.14	□□□□□ -0.63	not detected
SIS1	YNL007C	ECL1	P48235	211 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	MSE1	P48525	536 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	PMT5	P52867	743 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	NUP116	Q02630	1113 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	MRPL1	Q04599	285 aa		11.14	□□□□□ -0.63
SIS1	YNL007C	UTP21	Q06078	939 aa	Predicted RBP	11.14	□□□□□ -0.63
SIS1	YNL007C	HAA1	Q12753	694 aa	Known RBP	11.14	□□□□□ -0.63
SIS1	YNL007C	CPR2	P23285	205 aa		11.13	□□□□□ -0.63
SIS1	YNL007C	BUD23	P25627	275 aa	Predicted RBP	11.13	□□□□□ -0.63
SIS1	YNL007C	HOM6	P31116	359 aa	Known RBP	11.13	□□□□□ -0.63
SIS1	YNL007C	TMA19	P35691	167 aa	Known RBP	11.13	□□□□□ -0.63
SIS1	YNL007C	MLH1	P38920	769 aa		11.13	□□□□□ -0.63
SIS1	YNL007C	BRR6	P53062	197 aa		11.13	□□□□□ -0.63
SIS1	YNL007C	ARO8	P53090	500 aa	Known RBP	11.13	□□□□□ -0.63
SIS1	YNL007C	HLR1	Q04429	423 aa		11.13	□□□□□ -0.63
SIS1	YNL007C	COX20	Q04935	205 aa		11.13	□□□□□ -0.63
SIS1	YNL007C	RTN2	Q12443	393 aa		11.13	□□□□□ -0.63
SIS1	YNL007C	GCN4	P03069	281 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	PHO4	P07270	312 aa	Known RBP	11.12	□□□□□ -0.63
SIS1	YNL007C	HMG1	P12683	1054 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	MTH1	P35198	433 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	ANR2	P36090	516 aa	Predicted RBP	11.12	□□□□□ -0.63
SIS1	YNL007C	CCZ1	P38273	704 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	PTI1	P39927	425 aa	Predicted RBP	11.12	□□□□□ -0.63
SIS1	YNL007C	PMT6	P42934	759 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	ERV29	P53337	310 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	HNT3	Q08702	217 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	AKR2	Q12013	749 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	YOR343C	Q12484	108 aa		11.12	□□□□□ -0.63
SIS1	YNL007C	YPT1	P01123	206 aa	Known RBP	11.11	□□□□□ -0.63
SIS1	YNL007C	HIS3	P06633	220 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	MRP1	P10662	321 aa	Known RBP	11.11	□□□□□ -0.63
SIS1	YNL007C	GCN3	P14741	305 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	CHS7	P38843	316 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	PEX25	Q02969	394 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	YDR249C	Q03787	373 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	MRPL51	Q06090	140 aa	Predicted RBP	11.11	□□□□□ -0.63
SIS1	YNL007C	SSK1	Q07084	712 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	IRC19	Q07843	230 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	YOR376W	Q08900	122 aa		11.11	□□□□□ -0.63
SIS1	YNL007C	YRA1	Q12159	226 aa	Known RBP	11.11	□□□□□ -0.63
SIS1	YNL007C	PEP4	P07267	405 aa	Known RBP	11.1	□□□□□ -0.63
SIS1	YNL007C	STE12	P13574	688 aa		11.1	□□□□□ -0.63
SIS1	YNL007C	AIM17	P23180	465 aa	Known RBP	11.1	□□□□□ -0.63
SIS1	YNL007C	SRL3	P36167	246 aa		11.1	□□□□□ -0.63
SIS1	YNL007C	YER184C	P39961	794 aa		11.1	□□□□□ -0.63
SIS1	YNL007C	SUR7	P54003	302 aa		11.1	□□□□□ -0.63
SIS1	YNL007C	CGI121	Q03705	181 aa	Known RBP	11.1	□□□□□ -0.63
SIS1	YNL007C	MRPL35	Q06678	367 aa		11.1	□□□□□ -0.63
SIS1	YNL007C	YOR283W	Q12040	230 aa	Known RBP	11.1	□□□□□ -0.63
SIS1	YNL007C	BAG7	Q12128	409 aa		11.1	□□□□□ -0.63
SIS1	YNL007C	QCR7	P00128	127 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	SOD2	P00447	233 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	CDC9	P04819	755 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	CYT1	P07143	309 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	COX9	P07255	59 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	EHD3	P28817	500 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	PAU2	P32612	120 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	PTH1	P38876	190 aa	Known RBP	11.09	□□□□□ -0.63
SIS1	YNL007C	HPA3	P39979	161 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	OCA1	P50946	238 aa	Predicted RBP	11.09	□□□□□ -0.63
SIS1	YNL007C	DOC1	P53068	250 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	PFA5	Q03289	374 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	PLB2	Q03674	706 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	MDM30	Q05930	598 aa		11.09	□□□□□ -0.63
SIS1	YNL007C	RPS13	P05756	151 aa	Known RBP	11.08	□□□□□ -0.64
SIS1	YNL007C	DBF2	P22204	572 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	YKR073C	P36153	106 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	PEX32	P38292	413 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	11.08	□□□□□ -0.64	not detected
SIS1	YNL007C	YJR120W	P47157	116 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	SCS7	Q03529	384 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	SSY1	Q03770	852 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	DFG5	Q05031	458 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	NMA1	Q06178	401 aa	Known RBP	11.08	□□□□□ -0.64
SIS1	YNL007C	TSR2	Q06672	205 aa	Known RBP	11.08	□□□□□ -0.64
SIS1	YNL007C	ATG41	Q12048	136 aa		11.08	□□□□□ -0.64
SIS1	YNL007C	RPP2B	P02400	110 aa	Known RBP	11.07	□□□□□ -0.64
SIS1	YNL007C	STE50	P25344	346 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	RPC34	P32910	317 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	YKE4	P40544	346 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	POP1	P41812	875 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	ATG21	Q02887	496 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	NUP53	Q03790	475 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	GIS1	Q03833	894 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	BNA7	Q04066	261 aa		11.07	□□□□□ -0.64
SIS1	YNL007C	TPO3	Q06451	622 aa		11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 256.3 ms