RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W MEI5P32489 222 aa1.5□□□□□ -2.17
DDR48YMR173W GCG1P32656 232 aaKnown RBP1.5□□□□□ -2.17
DDR48YMR173W SUR1P33300 382 aa1.5□□□□□ -2.17
DDR48YMR173W PET8P38921 284 aa1.5□□□□□ -2.17
DDR48YMR173W PES4P39684 611 aa1.5□□□□□ -2.17
DDR48YMR173W YFL040WP43562 540 aa1.5□□□□□ -2.17
DDR48YMR173W YGR266WP53326 701 aa1.5□□□□□ -2.17
DDR48YMR173W CGI121Q03705 181 aaKnown RBP1.5□□□□□ -2.17
DDR48YMR173W SEC13Q04491 297 aaKnown RBP1.5□□□□□ -2.17
DDR48YMR173W BUR2Q05949 395 aa1.5□□□□□ -2.17
DDR48YMR173W PLB3Q08108 686 aa1.5□□□□□ -2.17
DDR48YMR173W TIM22Q12328 207 aa1.5□□□□□ -2.17
DDR48YMR173W SPT7P35177 1332 aa1.49□□□□□ -2.17
DDR48YMR173W RNR2P09938 399 aaKnown RBP1.49□□□□□ -2.17
DDR48YMR173W SPS100P13130 326 aa1.49□□□□□ -2.17
DDR48YMR173W CAJ1P39101 391 aa1.49□□□□□ -2.17
DDR48YMR173W SOP4P39543 234 aaPredicted RBP1.49□□□□□ -2.17
DDR48YMR173W OSH6Q02201 448 aa1.49□□□□□ -2.17
DDR48YMR173W YOR292CQ08743 309 aa1.49□□□□□ -2.17
DDR48YMR173W PRR2Q12310 699 aa1.49□□□□□ -2.17
DDR48YMR173W YAL063C-AQ3E791 96 aa1.49□□□□□ -2.17
DDR48YMR173W HIS3P06633 220 aa1.48□□□□□ -2.17
DDR48YMR173W RPL18AP0CX49 186 aaKnown RBP1.48□□□□□ -2.17
DDR48YMR173W RPL18BP0CX50 186 aaKnown RBP1.48□□□□□ -2.17
DDR48YMR173W GAL3P13045 520 aa1.48□□□□□ -2.17
DDR48YMR173W SYS1P41544 203 aa1.48□□□□□ -2.17
DDR48YMR173W YFL064CP43540 174 aa1.48□□□□□ -2.17
DDR48YMR173W YGR016WP53209 190 aa1.48□□□□□ -2.17
DDR48YMR173W YGR168CP53293 376 aa1.48□□□□□ -2.17
DDR48YMR173W YDR286CQ05530 114 aa1.48□□□□□ -2.17
DDR48YMR173W STE23Q06010 1027 aa1.48□□□□□ -2.17
DDR48YMR173W PGC1Q08959 321 aa1.48□□□□□ -2.17
DDR48YMR173W RPL26AP05743 127 aaKnown RBP1.47□□□□□ -2.17
DDR48YMR173W ERD1P16151 362 aa1.47□□□□□ -2.17
DDR48YMR173W VPS1P21576 704 aaKnown RBP1.47□□□□□ -2.17
DDR48YMR173W GPX1P36014 167 aa1.47□□□□□ -2.17
DDR48YMR173W RPL26BP53221 127 aaKnown RBP1.47□□□□□ -2.17
DDR48YMR173W RSM27P53305 110 aa1.47□□□□□ -2.17
DDR48YMR173W VPS68Q12016 184 aa1.47□□□□□ -2.17
DDR48YMR173W ADH3P07246 375 aaKnown RBP1.46□□□□□ -2.18
DDR48YMR173W TPM1P17536 199 aaKnown RBP1.46□□□□□ -2.18
DDR48YMR173W IFM1P25038 676 aa1.46□□□□□ -2.18
DDR48YMR173W MRPL6P32904 214 aa1.46□□□□□ -2.18
DDR48YMR173W YHR035WP38769 630 aa1.46□□□□□ -2.18
DDR48YMR173W UTP25P40498 721 aaKnown RBP1.46□□□□□ -2.18
DDR48YMR173W INA22P40576 216 aa1.46□□□□□ -2.18
DDR48YMR173W BAT2P47176 376 aaKnown RBP1.46□□□□□ -2.18
DDR48YMR173W IRC4Q03036 179 aa1.46□□□□□ -2.18
DDR48YMR173W ARC18Q05933 178 aaKnown RBP1.46□□□□□ -2.18
DDR48YMR173W YLR446WQ06204 433 aa1.46□□□□□ -2.18
DDR48YMR173W VMA2P16140 517 aaKnown RBP1.45□□□□□ -2.18
DDR48YMR173W YKL162CP36052 402 aa1.45□□□□□ -2.18
DDR48YMR173W TRM7P38238 310 aaKnown RBP1.45□□□□□ -2.18
DDR48YMR173W AIM20P40451 204 aa1.45□□□□□ -2.18
DDR48YMR173W MIG2P53035 382 aa1.45□□□□□ -2.18
DDR48YMR173W OKP1P53298 406 aa1.45□□□□□ -2.18
DDR48YMR173W CAB5Q03941 241 aa1.45□□□□□ -2.18
DDR48YMR173W SNX41Q04053 625 aa1.45□□□□□ -2.18
DDR48YMR173W YDL144CQ07589 356 aa1.45□□□□□ -2.18
DDR48YMR173W DCP1Q12517 231 aaPredicted RBP1.45□□□□□ -2.18
DDR48YMR173W LAG2Q92325 660 aa1.45□□□□□ -2.18
DDR48YMR173W CDC37P06101 506 aaKnown RBP1.44□□□□□ -2.18
DDR48YMR173W GAL7P08431 366 aa1.44□□□□□ -2.18
DDR48YMR173W PHO80P20052 293 aa1.44□□□□□ -2.18
DDR48YMR173W OPI1P21957 404 aa1.44□□□□□ -2.18
DDR48YMR173W ZRT1P32804 376 aa1.44□□□□□ -2.18
DDR48YMR173W MCH2P36032 473 aa1.44□□□□□ -2.18
DDR48YMR173W YER188WP40103 239 aa1.44□□□□□ -2.18
DDR48YMR173W YJR141WP47172 347 aaPredicted RBP1.44□□□□□ -2.18
DDR48YMR173W TVP15Q03860 143 aa1.44□□□□□ -2.18
DDR48YMR173W VPS20Q04272 221 aa1.44□□□□□ -2.18
DDR48YMR173W TY3A-GQ12173 290 aa1.44□□□□□ -2.18
DDR48YMR173W UTP23Q12339 254 aaKnown RBP1.44□□□□□ -2.18
DDR48YMR173W PAA1Q12447 191 aaKnown RBP1.44□□□□□ -2.18
DDR48YMR173W TY3A-IQ99219 290 aa1.44□□□□□ -2.18
DDR48YMR173W MSS116P15424 664 aaKnown RBP1.43□□□□□ -2.18
DDR48YMR173W TRX1P22217 103 aaKnown RBP1.43□□□□□ -2.18
DDR48YMR173W PET18P25362 215 aa1.43□□□□□ -2.18
DDR48YMR173W RRT12P25381 491 aa1.43□□□□□ -2.18
DDR48YMR173W MRPL3P36516 390 aa1.43□□□□□ -2.18
DDR48YMR173W SWC5P38326 303 aa1.43□□□□□ -2.18
DDR48YMR173W FET3P38993 636 aa1.43□□□□□ -2.18
DDR48YMR173W END3P39013 349 aa1.43□□□□□ -2.18
DDR48YMR173W AVT6P40074 448 aa1.43□□□□□ -2.18
DDR48YMR173W OST3P48439 350 aa1.43□□□□□ -2.18
DDR48YMR173W ALG9P53868 555 aaKnown RBP1.43□□□□□ -2.18
DDR48YMR173W MGR3Q04472 501 aa1.43□□□□□ -2.18
DDR48YMR173W SAM4Q08985 325 aaKnown RBP1.43□□□□□ -2.18
DDR48YMR173W DPM1P14020 267 aaKnown RBP1.42□□□□□ -2.18
DDR48YMR173W SCO1P23833 295 aa1.42□□□□□ -2.18
DDR48YMR173W YBR062CP38239 180 aa1.42□□□□□ -2.18
DDR48YMR173W SSO2P39926 295 aa1.42□□□□□ -2.18
DDR48YMR173W UBC13P52490 153 aa1.42□□□□□ -2.18
DDR48YMR173W SSU72P53538 206 aaPredicted RBP1.42□□□□□ -2.18
DDR48YMR173W PRO2P54885 456 aaKnown RBP1.42□□□□□ -2.18
DDR48YMR173W NNT1Q05874 261 aa1.42□□□□□ -2.18
DDR48YMR173W YLR297WQ05899 129 aa1.42□□□□□ -2.18
DDR48YMR173W PBP4Q07362 185 aaKnown RBP1.42□□□□□ -2.18
DDR48YMR173W YPR1Q12458 312 aa1.42□□□□□ -2.18
DDR48YMR173W RPL16BP26785 198 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms