RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C RBK1P25332 333 aa1.06□□□□□ -2.24
VPS20YMR077C GCG1P32656 232 aaKnown RBP1.06□□□□□ -2.24
VPS20YMR077C CDC13P32797 924 aaKnown RBP1.06□□□□□ -2.24
VPS20YMR077C MYO3P36006 1272 aa1.06□□□□□ -2.24
VPS20YMR077C GDT1P38301 280 aaPredicted RBP1.06□□□□□ -2.24
VPS20YMR077C SUB1P54000 292 aaKnown RBP1.06□□□□□ -2.24
VPS20YMR077C VPS9P54787 451 aa1.06□□□□□ -2.24
VPS20YMR077C CTS2Q06350 511 aa1.06□□□□□ -2.24
VPS20YMR077C YLR012CQ07927 99 aa1.06□□□□□ -2.24
VPS20YMR077C SWE1P32944 819 aa1.05□□□□□ -2.24
VPS20YMR077C YJL055WP47044 245 aa1.05□□□□□ -2.24
VPS20YMR077C INM2Q05533 292 aa1.05□□□□□ -2.24
VPS20YMR077C RPL6BP05739 176 aaKnown RBP1.04□□□□□ -2.24
VPS20YMR077C YOR062CP36025 268 aa1.04□□□□□ -2.24
VPS20YMR077C SPL2P38839 148 aa1.04□□□□□ -2.24
VPS20YMR077C COG3P40094 801 aa1.04□□□□□ -2.24
VPS20YMR077C YNR068CP53754 272 aa1.04□□□□□ -2.24
VPS20YMR077C RPL6AQ02326 176 aaKnown RBP1.04□□□□□ -2.24
VPS20YMR077C ERD1P16151 362 aa1.03□□□□□ -2.24
VPS20YMR077C UTP25P40498 721 aaKnown RBP1.03□□□□□ -2.24
VPS20YMR077C OST3P48439 350 aa1.03□□□□□ -2.24
VPS20YMR077C PRP24P49960 444 aaKnown RBP1.03□□□□□ -2.24
VPS20YMR077C FCF1Q05498 189 aaPredicted RBP1.03□□□□□ -2.24
VPS20YMR077C GAL7P08431 366 aa1.02□□□□□ -2.25
VPS20YMR077C CIN8P27895 1000 aa1.02□□□□□ -2.25
VPS20YMR077C FAA1P30624 700 aaKnown RBP1.02□□□□□ -2.25
VPS20YMR077C AVT6P40074 448 aa1.02□□□□□ -2.25
VPS20YMR077C AYR1P40471 297 aa1.02□□□□□ -2.25
VPS20YMR077C YIL012WP40551 113 aa1.02□□□□□ -2.25
VPS20YMR077C YPL278CQ08990 100 aa1.02□□□□□ -2.25
VPS20YMR077C RGS2Q99188 309 aa1.02□□□□□ -2.25
VPS20YMR077C GPX1P36014 167 aa1.01□□□□□ -2.25
VPS20YMR077C MRPL3P36516 390 aa1.01□□□□□ -2.25
VPS20YMR077C SUR2P38992 349 aa1.01□□□□□ -2.25
VPS20YMR077C YML6P51998 286 aa1.01□□□□□ -2.25
VPS20YMR077C YDL144CQ07589 356 aa1.01□□□□□ -2.25
VPS20YMR077C LAG2Q92325 660 aa1□□□□□ -2.25
VPS20YMR077C IFM1P25038 676 aa0.99□□□□□ -2.25
VPS20YMR077C YHL026CP38740 315 aa0.99□□□□□ -2.25
VPS20YMR077C SOP4P39543 234 aaPredicted RBP0.99□□□□□ -2.25
VPS20YMR077C PXR1P53335 271 aaPredicted RBP0.99□□□□□ -2.25
VPS20YMR077C YOR268CQ08734 132 aa0.99□□□□□ -2.25
VPS20YMR077C TFB5Q3E7C1 72 aaPredicted RBP0.99□□□□□ -2.25
VPS20YMR077C UBA1P22515 1024 aaKnown RBP0.98□□□□□ -2.25
VPS20YMR077C YCR102CP25608 368 aa0.98□□□□□ -2.25
VPS20YMR077C IMP1P28627 190 aa0.98□□□□□ -2.25
VPS20YMR077C ACB1P31787 87 aa0.98□□□□□ -2.25
VPS20YMR077C YIL089WP40500 205 aa0.98□□□□□ -2.25
VPS20YMR077C YJL016WP47072 561 aa0.98□□□□□ -2.25
VPS20YMR077C TAF6P53040 516 aa0.98□□□□□ -2.25
VPS20YMR077C YGR016WP53209 190 aa0.98□□□□□ -2.25
VPS20YMR077C YPL247CQ12523 523 aa0.98□□□□□ -2.25
VPS20YMR077C RDS1P25611 832 aa0.97□□□□□ -2.25
VPS20YMR077C MDL1P33310 695 aa0.97□□□□□ -2.25
VPS20YMR077C PXA2P34230 853 aa0.97□□□□□ -2.25
VPS20YMR077C BTT1P40314 149 aaPredicted RBP0.97□□□□□ -2.25
VPS20YMR077C SXM1Q04175 944 aaKnown RBP0.97□□□□□ -2.25
VPS20YMR077C YLL007CQ07799 665 aa0.97□□□□□ -2.25
VPS20YMR077C ATG5Q12380 294 aa0.97□□□□□ -2.25
VPS20YMR077C NUP157P40064 1391 aaKnown RBP0.96□□□□□ -2.26
VPS20YMR077C RAD10P06838 210 aa0.96□□□□□ -2.26
VPS20YMR077C YLL053CP0CD98 152 aa0.96□□□□□ -2.26
VPS20YMR077C OSM1P21375 501 aaKnown RBP0.96□□□□□ -2.26
VPS20YMR077C RPL16BP26785 198 aaKnown RBP0.96□□□□□ -2.26
VPS20YMR077C UTP6Q02354 440 aaKnown RBP0.96□□□□□ -2.26
VPS20YMR077C ATG15P25641 520 aa0.95□□□□□ -2.26
VPS20YMR077C VMA8P32610 256 aaKnown RBP0.95□□□□□ -2.26
VPS20YMR077C KRE29P40026 464 aa0.95□□□□□ -2.26
VPS20YMR077C HXT2P23585 541 aa0.94□□□□□ -2.26
VPS20YMR077C CAJ1P39101 391 aa0.94□□□□□ -2.26
VPS20YMR077C RPL10P41805 221 aaKnown RBP0.94□□□□□ -2.26
VPS20YMR077C TPN1P53099 579 aa0.94□□□□□ -2.26
VPS20YMR077C YLR446WQ06204 433 aa0.94□□□□□ -2.26
VPS20YMR077C PAR32Q12515 295 aaKnown RBP0.94□□□□□ -2.26
VPS20YMR077C ISD11Q6Q560 94 aa0.94□□□□□ -2.26
VPS20YMR077C MNE1P24720 663 aa0.93□□□□□ -2.26
VPS20YMR077C VMA5P31412 392 aaKnown RBP0.93□□□□□ -2.26
VPS20YMR077C RSC1P53236 928 aa0.93□□□□□ -2.26
VPS20YMR077C CAB4P53332 305 aa0.93□□□□□ -2.26
VPS20YMR077C SWT21P53873 357 aaPredicted RBP0.93□□□□□ -2.26
VPS20YMR077C PAN1P32521 1480 aa0.92□□□□□ -2.26
VPS20YMR077C YOL162WP0CF19 215 aa0.92□□□□□ -2.26
VPS20YMR077C YCR025CP25352 136 aa0.92□□□□□ -2.26
VPS20YMR077C GDI1P39958 451 aaKnown RBP0.92□□□□□ -2.26
VPS20YMR077C YER135CP40082 130 aa0.92□□□□□ -2.26
VPS20YMR077C RPA34P47006 233 aaPredicted RBP0.92□□□□□ -2.26
VPS20YMR077C YJL118WP47022 219 aa0.92□□□□□ -2.26
VPS20YMR077C DOA4P32571 926 aa0.91□□□□□ -2.26
VPS20YMR077C SKI2P35207 1287 aaKnown RBP RIP-Chip data0.91□□□□□ -2.26not detected
VPS20YMR077C DSE2P38844 325 aa0.91□□□□□ -2.26
VPS20YMR077C NUP57P48837 541 aa0.91□□□□□ -2.26
VPS20YMR077C COG7P53195 279 aa0.91□□□□□ -2.26
VPS20YMR077C RVB1Q03940 463 aaKnown RBP0.91□□□□□ -2.26
VPS20YMR077C YEL009C-AA0A023PZF2 135 aa0.9□□□□□ -2.27
VPS20YMR077C TPO5P36029 618 aa0.9□□□□□ -2.27
VPS20YMR077C SNX41Q04053 625 aa0.9□□□□□ -2.27
VPS20YMR077C UTP23Q12339 254 aaKnown RBP0.9□□□□□ -2.27
VPS20YMR077C CDC7P06243 507 aa0.89□□□□□ -2.27
VPS20YMR077C CAT2P32796 670 aaKnown RBP0.89□□□□□ -2.27
VPS20YMR077C YBR062CP38239 180 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms